RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 TMEM200CA6NKL6 621 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 AHRRA9YTQ3 701 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 LPXNO60711 386 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 FAM153BP0C7A2 387 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 HNRNPLP14866 589 aaKnown RBP eCLIP4.49□□□□□ -1.69
SPG11-222ENST00000560435 TYRP1P17643 537 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 AVPR1BP47901 424 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 TMEM177Q53S58 311 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 IQSEC1Q6DN90 963 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 FBXO42Q6P3S6 717 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 LRP10Q7Z4F1 713 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 MAGEB10Q96LZ2 347 aaPredicted RBP4.49□□□□□ -1.69
SPG11-222ENST00000560435 PDCD2LQ9BRP1 358 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 SYBUQ9NX95 663 aa4.49□□□□□ -1.69
SPG11-222ENST00000560435 EIF2B4Q9UI10 523 aaKnown RBP4.49□□□□□ -1.69
SPG11-222ENST00000560435 SPATA31A6Q5VVP1 1343 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 DIAPH1O60610 1272 aaKnown RBP4.48□□□□□ -1.69
SPG11-222ENST00000560435 BCAR1P56945 870 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 TRIM61Q5EBN2 209 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 EPHA10Q5JZY3 1008 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 TTC38Q5R3I4 469 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 ARHGEF19Q8IW93 802 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 NELL1Q92832 810 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
SPG11-222ENST00000560435 COQ10AQ96MF6 247 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 WDR11Q9BZH6 1224 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 INSL6Q9Y581 213 aa4.48□□□□□ -1.69
SPG11-222ENST00000560435 NRP1O14786 923 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 ZNF185O15231 689 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 HOXA3O43365 443 aaPredicted RBP4.47□□□□□ -1.69
SPG11-222ENST00000560435 KCNA6P17658 529 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 FAM189BP81408 668 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 FAM214AQ32MH5 1076 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 PRR16Q569H4 304 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 ZC3H12BQ5HYM0 836 aaKnown RBP4.47□□□□□ -1.69
SPG11-222ENST00000560435 CCDC62Q6P9F0 684 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 LCORLQ8N3X6 602 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 LINC00476Q8WZB0 136 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 SCLYQ96I15 445 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 CPPED1Q9BRF8 314 aaPredicted RBP4.47□□□□□ -1.69
SPG11-222ENST00000560435 ENKD1Q9H0I2 346 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 CCDC113Q9H0I3 377 aa4.47□□□□□ -1.69
SPG11-222ENST00000560435 GAGE12BA1L429 117 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 GAGE12HA6NDE8 117 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 RNASET2O00584 256 aaKnown RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 TCF3P15923 654 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 KIF11P52732 1056 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 VPS72Q15906 364 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 ARHGAP44Q17R89 818 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 ERCC6LQ2NKX8 1250 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 ZNF362Q5T0B9 420 aaPredicted RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 PRAMEF9Q5VWM5 478 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 ABHD17CQ6PCB6 329 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 LILRA3Q8N6C8 439 aaPredicted RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 GLB1L3Q8NCI6 653 aaPredicted RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 DCLRE1CQ96SD1 692 aaKnown RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 OSBPL6Q9BZF3 934 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 PITHD1Q9GZP4 211 aaPredicted RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 ACSS2Q9NR19 701 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 DKK2Q9UBU2 259 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 SYNPO2Q9UMS6 1093 aa4.46□□□□□ -1.7
SPG11-222ENST00000560435 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.46□□□□□ -1.7
SPG11-222ENST00000560435 EPN1Q9Y6I3 576 aaPredicted RBP4.46□□□□□ -1.7
SPG11-222ENST00000560435 TCRBV16S1A1N1A0A5B0 115 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 DVL2O14641 736 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 APOBEC3AP31941 199 aaPredicted RBP4.45□□□□□ -1.7
SPG11-222ENST00000560435 MECP2P51608 486 aaKnown RBP4.45□□□□□ -1.7
SPG11-222ENST00000560435 SEC24CP53992 1094 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 MAN2A1Q16706 1144 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 GDF7Q7Z4P5 450 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 FAM83AQ86UY5 434 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 FAM98AQ8NCA5 519 aaKnown RBP4.45□□□□□ -1.7
SPG11-222ENST00000560435 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 TUBGCP5Q96RT8 1024 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 RSAD1Q9HA92 442 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 AKIP1Q9NQ31 210 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 TRPM5Q9NZQ8 1165 aa4.45□□□□□ -1.7
SPG11-222ENST00000560435 A0A0A6YYJ9 748 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 DNAJC6O75061 913 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 KRT37O76014 449 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 NCR1O76036 304 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 FSBPO95073 299 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 C1RP00736 705 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 HKR1P10072 659 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 BMPR1AP36894 532 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 ELLP55199 621 aaPredicted RBP4.44□□□□□ -1.7
SPG11-222ENST00000560435 WNT3AP56704 352 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 EPHA7Q15375 998 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 BEAN1Q3B7T3 259 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 DOK3Q7L591 496 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 BRAPQ7Z569 592 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 NME9Q86XW9 330 aa4.44□□□□□ -1.7
SPG11-222ENST00000560435 CKAP2LQ8IYA6 745 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms