RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
LINC02253-202ENST00000560314 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
LINC02253-202ENST00000560314 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
LINC02253-202ENST00000560314 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
LINC02253-202ENST00000560314 A0A087WZ62 844 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
LINC02253-202ENST00000560314 DKC1O60832 514 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC02253-202ENST00000560314 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
LINC02253-202ENST00000560314 DEXIO95424 95 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 CXCL14O95715 111 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 PDIA3P30101 505 aaKnown RBP12.52□□□□□ -0.41
LINC02253-202ENST00000560314 PSMC5P62195 406 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 DRP2Q13474 957 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 ATAT1Q5SQI0 421 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 MBOAT7Q96N66 472 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
LINC02253-202ENST00000560314 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 ARID2Q68CP9 1835 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 C2orf16Q68DN1 1984 aa12.52□□□□□ -0.41
LINC02253-202ENST00000560314 NT5C1B-RDH14C9J2C7 533 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 M0R2N6 131 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 GFRA3O60609 400 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 STBD1O95210 358 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 TDP2O95551 362 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 BRD1O95696 1058 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 SSRP1Q08945 709 aaKnown RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 KRT25Q7Z3Z0 450 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 CABP7Q86V35 215 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 TMEM173Q86WV6 379 aaPredicted RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 ATOH1Q92858 354 aaPredicted RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 NLRP4Q96MN2 994 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 DBR1Q9UK59 544 aaKnown RBP12.51□□□□□ -0.41
LINC02253-202ENST00000560314 CNTNAP2Q9UHC6 1331 aa12.51□□□□□ -0.41
LINC02253-202ENST00000560314 ZFHX2Q9C0A1 2572 aaPredicted RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CPLX1O14810 134 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 GAS2O43903 313 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 OFD1O75665 1012 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 GALTP07902 379 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 GCFC2P16383 781 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CPLX2Q6PUV4 134 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CCDC149Q6ZUS6 474 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 ANO5Q75V66 913 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 SLC22A17Q8WUG5 538 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 FAM20AQ96MK3 541 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CYP26B1Q9NR63 512 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 KANSL3Q9P2N6 904 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
LINC02253-202ENST00000560314 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
LINC02253-202ENST00000560314 TMEM150BA6NC51 233 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 EPCAMP16422 314 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 RFC5P40937 340 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 QARSP47897 775 aaKnown RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 ELMSAN1Q6PJG2 1045 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 PSPC1Q8WXF1 523 aaKnown RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 LPPQ93052 612 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 GJA10Q969M2 543 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
LINC02253-202ENST00000560314 RSAD1Q9HA92 442 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 IFT122Q9HBG6 1241 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 FAM86C1Q9NVL1 165 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
LINC02253-202ENST00000560314 GVINP1Q7Z2Y8 2422 aa12.48□□□□□ -0.41
LINC02253-202ENST00000560314 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
LINC02253-202ENST00000560314 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms