RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 KMT5AQ9NQR1 393 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 PDLIM7Q9NR12 457 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 CGNQ9P2M7 1197 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 NFE2L3Q9Y4A8 694 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 NR2E3Q9Y5X4 410 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 DNAH12Q6ZR08 3092 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 ARID2Q68CP9 1835 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 PDXKO00764 312 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 ADCY6O43306 1168 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 CBFA2T2O43439 604 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 GNA14O95837 355 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 F2P00734 622 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 SERPINC1P01008 464 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 KLRC1P26715 233 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NMT1P30419 496 aaKnown RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 ARL2P36404 184 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NAMPTP43490 491 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NPTX2P47972 431 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 PSEN2P49810 448 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 EFNA5P52803 228 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 ACLYP53396 1101 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NCKAP1LP55160 1127 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 IGBP1P78318 339 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 GTF2BQ00403 316 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 FKBP3Q00688 224 aaKnown RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 BEX3Q00994 111 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 STRN3Q13033 797 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 MAPK7Q13164 816 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 GRIK4Q16099 956 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 BMT2Q1RMZ1 405 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 KIAA0753Q2KHM9 967 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 EDRF1Q3B7T1 1238 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 FILIP1LQ4L180 1135 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NFRKBQ6P4R8 1299 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 EPM2AIP1Q7L775 607 aaPredicted RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 HAUS6Q7Z4H7 955 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 CREBRFQ8IUR6 639 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 ZBTB8OSQ8IWT0 167 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 NELFCDQ8IXH7 590 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 DAW1Q8N136 415 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 METTL13Q8N6R0 699 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 C7orf31Q8N865 590 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 SCFD1Q8WVM8 642 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 HPS3Q969F9 1004 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 TMEM143Q96AN5 459 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 PAWRQ96IZ0 340 aaKnown RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 GLT1D1Q96MS3 346 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 CEP89Q96ST8 783 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 MAP7D2Q96T17 732 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 GBP3Q9H0R5 595 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 C2orf40Q9H1Z8 148 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 TYW1Q9NV66 732 aaKnown RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 FANCLQ9NW38 375 aa7.07□□□□□ -1.28
SPG11-221ENST00000560299 SUCLA2Q9P2R7 463 aaPredicted RBP7.07□□□□□ -1.28
SPG11-221ENST00000560299 IGKV6-21A0A0C4DH24 114 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 C17orf102A2RUQ5 167 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 LRRIQ4A6NIV6 560 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 GOLGA6L6A8MZA4 724 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 K7ERI5 159 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 HAS3O00219 553 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 CETN3O15182 167 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SLC16A4O15374 487 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 PRPF6O94906 941 aaKnown RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 C22orf31O95567 290 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 PGK1P00558 417 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SMIM10L2AP0DMW4 78 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SMIM10L2BP0DMW5 78 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 MYBP10242 640 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 PRKCSHP14314 528 aaPredicted RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 HOXB1P14653 301 aaPredicted RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 PTGS1P23219 599 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 EEF1GP26641 437 aaKnown RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 HOXC8P31273 242 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 BMP8BP34820 402 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SOX10P56693 466 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 UBASH3AP57075 661 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 PURAQ00577 322 aaKnown RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 POU5F1BQ06416 359 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 RBL2Q08999 1139 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 ADAM9Q13443 819 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 MYBPC2Q14324 1141 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 NCAPHQ15003 741 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 PRPF38BQ5VTL8 546 aaKnown RBP7.06□□□□□ -1.28
SPG11-221ENST00000560299 ANKRD40Q6AI12 368 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 TTI2Q6NXR4 508 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SARM1Q6SZW1 724 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 MTHFD1LQ6UB35 978 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 RHPN2Q8IUC4 686 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 VTI1AQ96AJ9 217 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 BICD1Q96G01 975 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 SEMA6BQ9H3T3 888 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
SPG11-221ENST00000560299 POLD4Q9HCU8 107 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms