RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 CLEC14AQ86T13 490 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 ELOA2Q8IYF1 753 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-218ENST00000560236 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-218ENST00000560236 PGBD4Q96DM1 585 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 DYDC2Q96IM9 177 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 XDHP47989 1333 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 UHRF1BP1LA0JNW5 1464 aa5.15□□□□□ -1.58
LRRC28-218ENST00000560236 MAGI3Q5TCQ9 1506 aa5.15□□□□□ -1.58
LRRC28-218ENST00000560236 UBA6A0AVT1 1052 aaPredicted RBP5.15□□□□□ -1.59
LRRC28-218ENST00000560236 GOLGA6L6A8MZA4 724 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 MFAP3LO75121 409 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 VSIG10L2P0DP72 767 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 BMP5P22003 454 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 RABGGTBP53611 331 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 COL10A1Q03692 680 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 RABL3Q5HYI8 236 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 TTC38Q5R3I4 469 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 PRAMEF9Q5VWM5 478 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 MFSD5Q6N075 450 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 MRGPREQ86SM8 312 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 DDX53Q86TM3 631 aaKnown RBP5.15□□□□□ -1.59
LRRC28-218ENST00000560236 ATXN2LQ8WWM7 1075 aaKnown RBP5.15□□□□□ -1.59
LRRC28-218ENST00000560236 ARL8AQ96BM9 186 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 PCIF1Q9H4Z3 704 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 TRIM39Q9HCM9 518 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 ACSS2Q9NR19 701 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 POLR3BQ9NW08 1133 aaPredicted RBP5.15□□□□□ -1.59
LRRC28-218ENST00000560236 MADDQ8WXG6 1647 aa5.15□□□□□ -1.59
LRRC28-218ENST00000560236 RIMS1Q86UR5 1692 aaKnown RBP5.15□□□□□ -1.59
LRRC28-218ENST00000560236 PTPRGP23470 1445 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 KLRG2A4D1S0 409 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 M0R2C6 588 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 DAPK3O43293 454 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 IPO13O94829 963 aaKnown RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 JUNP05412 331 aaKnown RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 MECP2P51608 486 aaKnown RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 BMP8AQ7Z5Y6 402 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 SYNE4Q8N205 404 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 ZNF276Q8N554 614 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 MB21D1Q8N884 522 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 THAP3Q8WTV1 239 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 ZNF512Q96ME7 567 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 TUBGCP5Q96RT8 1024 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 SRPK1Q96SB4 655 aaKnown RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 MNTQ99583 582 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 NCDNQ9UBB6 729 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 DNAI1Q9UI46 699 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 SETD1BQ9UPS6 1966 aaKnown RBP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 PREX1Q8TCU6 1659 aa5.14□□□□□ -1.59
LRRC28-218ENST00000560236 WRNQ14191 1432 aaPredicted RBP eCLIP5.14□□□□□ -1.59
LRRC28-218ENST00000560236 ZCCHC11Q5TAX3 1644 aaKnown RBP5.13□□□□□ -1.59
LRRC28-218ENST00000560236 B4E1Z4 1266 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 DVL2O14641 736 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 GCP02774 474 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 CYP17A1P05093 508 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 BCAR1P56945 870 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 HTR3DQ70Z44 454 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 NME9Q86XW9 330 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 JMYQ8N9B5 988 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 CHST14Q8NCH0 376 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 RPGRQ92834 1020 aaKnown RBP5.13□□□□□ -1.59
LRRC28-218ENST00000560236 LENG9Q96B70 501 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 C14orf93Q9H972 538 aaKnown RBP5.13□□□□□ -1.59
LRRC28-218ENST00000560236 NCOA5Q9HCD5 579 aaKnown RBP5.13□□□□□ -1.59
LRRC28-218ENST00000560236 SAMD15Q9P1V8 674 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 TRPS1Q9UHF7 1281 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 SYNPO2Q9UMS6 1093 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 STRCQ7RTU9 1775 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 ARAP3Q8WWN8 1544 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 KDM5BQ9UGL1 1544 aa5.13□□□□□ -1.59
LRRC28-218ENST00000560236 BIVM-ERCC5R4GMW8 1640 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 H7C1D1 291 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
LRRC28-218ENST00000560236 RHOBTB3O94955 611 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 HNRNPLP14866 589 aaKnown RBP eCLIP5.12□□□□□ -1.591e-7■■■□□ 14.9
LRRC28-218ENST00000560236 GNAT2P19087 354 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 NPEPPSP55786 919 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 ZNF174Q15697 407 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 MBNL2Q5VZF2 373 aaKnown RBP5.12□□□□□ -1.59
LRRC28-218ENST00000560236 ZCCHC8Q6NZY4 707 aaKnown RBP5.12□□□□□ -1.59
LRRC28-218ENST00000560236 VRK3Q8IV63 474 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 KIAA1958Q8N8K9 716 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 MDGA1Q8NFP4 955 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 C16orf92Q96LL3 132 aa5.12□□□□□ -1.59
LRRC28-218ENST00000560236 PTPDC1A2A3K4 754 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 IGFALSP35858 605 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 KIR2DL3P43628 341 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 SPIDRQ14159 915 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 MYBPC3Q14896 1274 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 EPHA7Q15375 998 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 C1QL3Q5VWW1 255 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 CMTM4Q8IZR5 234 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 GPR150Q8NGU9 434 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 ST8SIA2Q92186 375 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 MLST8Q9BVC4 326 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 HAPLN2Q9GZV7 340 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 CABP5Q9NP86 173 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms