RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GCOM2Q9BZD3 368 aaPredicted RBP22.3■■□□□ 1.16
RABGGTA-214ENST00000560163 IGKV6-21A0A0C4DH24 114 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 MED19A0JLT2 244 aaPredicted RBP22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 SKIP12755 728 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 TBC1D8BQ0IIM8 1120 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 CMASQ8NFW8 434 aaPredicted RBP22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 EMILIN2Q9BXX0 1053 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 NIFKQ9BYG3 293 aaKnown RBP22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 FAM105AQ9NUU6 356 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 TCEAL9Q9UHQ7 104 aa22.29■■□□□ 1.16
RABGGTA-214ENST00000560163 A0A087WZ62 844 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 STBD1O95210 358 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 KLRC2P26717 231 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 TWF2Q6IBS0 349 aaKnown RBP22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 RSAD2Q8WXG1 361 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 TCEANC2Q96MN5 208 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 FDXACB1Q9BRP7 624 aaPredicted RBP22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 ESYT1Q9BSJ8 1104 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 RHOBTB2Q9BYZ6 727 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 STK39Q9UEW8 545 aa22.28■■□□□ 1.16
RABGGTA-214ENST00000560163 MSH4O15457 936 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 DDHD2O94830 711 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 REXO1Q8N1G1 1221 aaKnown RBP22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 SLC44A3Q8N4M1 653 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 RIT2Q99578 217 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 INPP5FQ9Y2H2 1132 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 R4GN57 208 aa22.27■■□□□ 1.16
RABGGTA-214ENST00000560163 GOLGA8AA7E2F4 631 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 GOLGA8BA8MQT2 603 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 PAPLNO95428 1278 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 CFHP08603 1231 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 SFPQP23246 707 aaKnown RBP eCLIP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 ADD1P35611 737 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 AFF1P51825 1210 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 RCAN1P53805 252 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 AGMOQ6ZNB7 445 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 DHX32Q7L7V1 743 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 KCNG4Q8TDN1 519 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 GBP3Q9H0R5 595 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 C6orf50Q9HD87 102 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 WDR6Q9NNW5 1121 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 DLGAP2Q9P1A6 1054 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 PIN4Q9Y237 131 aaKnown RBP22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 OTOGLQ3ZCN5 2332 aa22.26■■□□□ 1.15
RABGGTA-214ENST00000560163 SFNP31947 248 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 RAB27AP51159 221 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 CYP26C1Q6V0L0 522 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 ZNF410Q86VK4 478 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 KIAA2013Q8IYS2 634 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 SLC5A5Q92911 643 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 INO80BQ9C086 356 aaPredicted RBP22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 UNC45AQ9H3U1 944 aa22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 MRPL17Q9NRX2 175 aaKnown RBP22.25■■□□□ 1.15
RABGGTA-214ENST00000560163 FANCMQ8IYD8 2048 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 NCOR2Q9Y618 2525 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 TMEM150BA6NC51 233 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 EFEMP2O95967 443 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 ALDH2P05091 517 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 SSBP05455 408 aaKnown RBP eCLIP22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 DGLUCYQ7Z3D6 616 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 MRPL10Q7Z7H8 261 aaKnown RBP22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 TMEM175Q9BSA9 504 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 MAN1C1Q9NR34 630 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 PCDHB2Q9Y5E7 798 aa22.24■■□□□ 1.15
RABGGTA-214ENST00000560163 CEP250Q9BV73 2442 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 DOCK8Q8NF50 2099 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 KLF18A0A0U1RQI7 1052 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 CCDC195A0A1B0GUA6 201 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 SPDYE4A6NLX3 237 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 STK25O00506 426 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 MAFO75444 373 aaPredicted RBP22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 SRFP11831 508 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 DNM2P50570 870 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 JAK3P52333 1124 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 MTERF2Q49AM1 385 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 XKR3Q5GH77 459 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 PHLDB3Q6NSJ2 640 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 B3GNT9Q6UX72 402 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 RIN2Q8WYP3 895 aaPredicted RBP22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 NXPE3Q969Y0 559 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 PGBD4Q96DM1 585 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 MYADMQ96S97 322 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 SH2D3AQ9BRG2 576 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 TBC1D17Q9HA65 648 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 IFT122Q9HBG6 1241 aa22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 SUCLA2Q9P2R7 463 aaPredicted RBP22.23■■□□□ 1.15
RABGGTA-214ENST00000560163 NRP1O14786 923 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 CHMP2AO43633 222 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 GAS7O60861 476 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 PSMD10O75832 226 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 SOD2P04179 222 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 GNA11P29992 359 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 USP11P51784 963 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 PUM1Q14671 1186 aaKnown RBP eCLIP22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 NONOQ15233 471 aaKnown RBP eCLIP22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 ADCK5Q3MIX3 580 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 TSGA10IPQ3SY00 556 aa22.22■■□□□ 1.15
RABGGTA-214ENST00000560163 TAS1R1Q7RTX1 841 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms