RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MGEA5O60502 916 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 SRGAP2CP0DJJ0 459 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 EIF4BP23588 611 aaKnown RBP10.01□□□□□ -0.81
HMG20A-209ENST00000559728 HOXA11P31270 313 aaPredicted RBP10.01□□□□□ -0.81
HMG20A-209ENST00000559728 CD52P31358 61 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 RFC2P35250 354 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 SYKP43405 635 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 NPTX2P47972 431 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 DNM2P50570 870 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 FPGSQ05932 587 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 CUL4BQ13620 913 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
HMG20A-209ENST00000559728 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 C9orf50Q5SZB4 431 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 RASIP1Q5U651 963 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 KRBA2Q6ZNG9 492 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 TSHZ1Q6ZSZ6 1077 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 SV2BQ7L1I2 683 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 DYMQ7RTS9 669 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 DEFB128Q7Z7B8 93 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 ZNF410Q86VK4 478 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 TMEM199Q8N511 208 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 RNF149Q8NC42 400 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 RASSF8Q8NHQ8 419 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 KIFAP3Q92845 792 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMG20A-209ENST00000559728 NLRP4Q96MN2 994 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 MAP7D2Q96T17 732 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMG20A-209ENST00000559728 TIPINQ9BVW5 301 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 STRA6Q9BX79 667 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 NFKBIZQ9BYH8 718 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 IL23AQ9NPF7 189 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 ARHGAP28Q9P2N2 729 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 PRKAG2Q9UGJ0 569 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 ODF2LQ9ULJ1 636 aa10.01□□□□□ -0.81
HMG20A-209ENST00000559728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10□□□□□ -0.81
HMG20A-209ENST00000559728 DPYSL4O14531 572 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
HMG20A-209ENST00000559728 PLS3P13797 630 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 NAMPTP43490 491 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 NCKAP1LP55160 1127 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 PEX3P56589 373 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 UBE2HP62256 183 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 MBTD1Q05BQ5 628 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 CAMK2BQ13554 666 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 DSC3Q14574 896 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 ZNF365Q70YC5 407 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 TMEM161BQ8NDZ6 487 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 NLRP7Q8WX94 980 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 CCDC43Q96MW1 224 aaKnown RBP10□□□□□ -0.81
HMG20A-209ENST00000559728 BLZF1Q9H2G9 400 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 FZD8Q9H461 694 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 MAGEF1Q9HAY2 307 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 CXXC1Q9P0U4 656 aaPredicted RBP10□□□□□ -0.81
HMG20A-209ENST00000559728 PADI3Q9ULW8 664 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 ST3GAL5Q9UNP4 418 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 GINS2Q9Y248 185 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 USP20Q9Y2K6 914 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 PCDHGA4Q9Y5G9 962 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 TRIP12Q14669 1992 aaPredicted RBP10□□□□□ -0.81
HMG20A-209ENST00000559728 ARID2Q68CP9 1835 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 LAMA3Q16787 3333 aa10□□□□□ -0.81
HMG20A-209ENST00000559728 SIP14410 1827 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 B4GALT5O43286 388 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 TSPAN1O60635 241 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 BMP8BP34820 402 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 AFMP43652 599 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 CASP5P51878 434 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 CDC42EP1Q00587 391 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 DPYDQ12882 1025 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 PPIGQ13427 754 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMG20A-209ENST00000559728 SHHQ15465 462 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 UBXN11Q5T124 520 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 SRGAP1Q7Z6B7 1085 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 USP38Q8NB14 1042 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 SPATA20Q8TB22 786 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 GPT2Q8TD30 523 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 HERVK_113Q902F9 699 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 HPS3Q969F9 1004 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 DRC1Q96MC2 740 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
HMG20A-209ENST00000559728 IFIH1Q9BYX4 1025 aaKnown RBP9.99□□□□□ -0.81
HMG20A-209ENST00000559728 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
HMG20A-209ENST00000559728 C17orf75Q9HAS0 396 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 USP25Q9UHP3 1055 aa9.99□□□□□ -0.81
HMG20A-209ENST00000559728 MYH9P35579 1960 aaKnown RBP9.98□□□□□ -0.81
HMG20A-209ENST00000559728 LRRIQ4A6NIV6 560 aa9.98□□□□□ -0.81
HMG20A-209ENST00000559728 M0QZ92 97 aa9.98□□□□□ -0.81
HMG20A-209ENST00000559728 ENPP3O14638 875 aa9.98□□□□□ -0.81
HMG20A-209ENST00000559728 ABLIM1O14639 778 aa9.98□□□□□ -0.81
HMG20A-209ENST00000559728 SLC16A4O15374 487 aa9.98□□□□□ -0.81
HMG20A-209ENST00000559728 RPS6KA5O75582 802 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms