RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 E7EVH7 732 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 ENC1O14682 589 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 THAP12O43422 761 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 MED24O75448 989 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 GFPT2O94808 682 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 TGFB3P10600 412 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 PTPROQ16827 1216 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 OR6B3Q8NGW1 331 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 BTBD19C9JJ37 291 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 H3BRB1 525 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 TRIM66O15016 1216 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 ARRDC4Q8NCT1 418 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 POLR3CQ9BUI4 534 aaPredicted RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 TUT1Q9H6E5 874 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 EIF3CLB5ME19 914 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 FOXP2O15409 715 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 SUPT20HL2P0C7V6 817 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 CEP85LQ5SZL2 805 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 CDR2LQ86X02 465 aaPredicted RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 CAPNS2Q96L46 248 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 GMLQ99445 158 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 EIF3CQ99613 913 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 PPANQ9NQ55 473 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 PEX10O60683 326 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 UPP2O95045 317 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 KCNA3P22001 575 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 ACOT2P49753 483 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CLCN3P51790 818 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 FAM117BQ6P1L5 589 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CYP39A1Q9NYL5 469 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RPS6KA5O75582 802 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CYP11B2P19099 503 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RFC5P40937 340 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RBL2Q08999 1139 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 KCNB1Q14721 858 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RSRC2Q7L4I2 434 aaKnown RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 PEX26Q7Z412 305 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 AGO4Q9HCK5 861 aaKnown RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SAMD15Q9P1V8 674 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 SYNJ2BP-COX16A0A087WUM0 186 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 TBC1D8O95759 1140 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 PLS3P13797 630 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 FERP16591 822 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CIITAP33076 1130 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 VAMP7P51809 220 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CCZ1BP86790 482 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CCZ1P86791 482 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CDC42EP1Q00587 391 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 E4F1Q66K89 784 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 FAM133AQ8N9E0 248 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 TIPINQ9BVW5 301 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 RNF208Q9H0X6 261 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 COX16Q9P0S2 106 aa11.48□□□□□ -0.57
CARMIL3-202ENST00000559694 ASAP2O43150 1006 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 PPFIA4O75335 1185 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 KLRC1P26715 233 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 KSR1Q8IVT5 923 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 HEXIM2Q96MH2 286 aaKnown RBP11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 GPC3P51654 580 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 FMR1Q06787 632 aaKnown RBP eCLIP11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 IQCB1Q15051 598 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 ANKRD40Q6AI12 368 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 RINT1Q6NUQ1 792 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 PCSK9Q8NBP7 692 aaKnown RBP11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 BEST2Q8NFU1 509 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 TINF2Q9BSI4 451 aa11.47□□□□□ -0.57
CARMIL3-202ENST00000559694 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms