RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 NOP2P46087 812 aaKnown RBP12.02□□□□□ -0.49
SPG11-217ENST00000559511 PEX3P56589 373 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 PSMC5P62195 406 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 GTF2BQ00403 316 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 ALCAMQ13740 583 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 PTPROQ16827 1216 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 PHLDB3Q6NSJ2 640 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 VPS36Q86VN1 386 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 U2AF1L4Q8WU68 220 aaKnown RBP12.02□□□□□ -0.49
SPG11-217ENST00000559511 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 CCDC43Q96MW1 224 aaKnown RBP12.02□□□□□ -0.49
SPG11-217ENST00000559511 ACCSQ96QU6 501 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 SYT11Q9BT88 431 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 VIPAS39Q9H9C1 493 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 RNF14Q9UBS8 474 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 EMSYQ7Z589 1322 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 H2AFZP0C0S5 128 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 JAK3P52333 1124 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 RNASE9P60153 205 aaKnown RBP12.01□□□□□ -0.49
SPG11-217ENST00000559511 KRT76Q01546 638 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 C1orf220Q5T0J3 134 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 C8orf74Q6P047 294 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 H2AFVQ71UI9 128 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 INTS8Q75QN2 995 aaKnown RBP12.01□□□□□ -0.49
SPG11-217ENST00000559511 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 GLYCTKQ8IVS8 523 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 C12orf56Q8IXR9 622 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 TMEM174Q8WUU8 243 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 HOXC10Q9NYD6 342 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 HSPBP1Q9NZL4 362 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 STIM2Q9P246 746 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 VPS18Q9P253 973 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 TELO2Q9Y4R8 837 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 MYPNQ86TC9 1320 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 KIF4AO95239 1232 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 NR3C2P08235 984 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 KRT13P13646 458 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 SFNP31947 248 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPG11-217ENST00000559511 VAMP7P51809 220 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 ARHGAP44Q17R89 818 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 ANO5Q75V66 913 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 PLEKHO2Q8TD55 490 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 RUBCNQ92622 972 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 ST6GALNAC4Q9H4F1 302 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 TCEAL9Q9UHQ7 104 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 ADAM21Q9UKJ8 722 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
SPG11-217ENST00000559511 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
SPG11-217ENST00000559511 FAM170AA1A519 330 aa12□□□□□ -0.49
SPG11-217ENST00000559511 ERICH4A6NGS2 130 aa12□□□□□ -0.49
SPG11-217ENST00000559511 TMCO5BA8MYB1 307 aa12□□□□□ -0.49
SPG11-217ENST00000559511 KCNK3O14649 394 aa12□□□□□ -0.49
SPG11-217ENST00000559511 RGS20O76081 388 aa12□□□□□ -0.49
SPG11-217ENST00000559511 SYF2O95926 243 aaKnown RBP12□□□□□ -0.49
SPG11-217ENST00000559511 ZBTB48P10074 688 aaPredicted RBP12□□□□□ -0.49
SPG11-217ENST00000559511 CCND2P30279 289 aa12□□□□□ -0.49
SPG11-217ENST00000559511 GALCP54803 685 aa12□□□□□ -0.49
SPG11-217ENST00000559511 RPS6KA1Q15418 735 aa12□□□□□ -0.49
SPG11-217ENST00000559511 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
SPG11-217ENST00000559511 TREML2Q5T2D2 321 aa12□□□□□ -0.49
SPG11-217ENST00000559511 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
SPG11-217ENST00000559511 PALB2Q86YC2 1186 aa12□□□□□ -0.49
SPG11-217ENST00000559511 XXYLT1Q8NBI6 393 aa12□□□□□ -0.49
SPG11-217ENST00000559511 TIPINQ9BVW5 301 aa12□□□□□ -0.49
SPG11-217ENST00000559511 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
SPG11-217ENST00000559511 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
SPG11-217ENST00000559511 A1CFQ9NQ94 594 aaKnown RBP12□□□□□ -0.49
SPG11-217ENST00000559511 CYP39A1Q9NYL5 469 aa12□□□□□ -0.49
SPG11-217ENST00000559511 INTUQ9ULD6 942 aa12□□□□□ -0.49
SPG11-217ENST00000559511 A0A0A6YYK5 440 aaPredicted RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 FOXN3O00409 490 aaPredicted RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 PHACTR2O75167 634 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ADRB2P07550 413 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 GLI1P08151 1106 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 GCLMP48507 274 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 SOX10P56693 466 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 EPC2Q52LR7 807 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 SLFN11Q7Z7L1 901 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ARHGEF19Q8IW93 802 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ACAD9Q9H845 621 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 MED4Q9NPJ6 270 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ANKEF1Q9NU02 776 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 CSADQ9Y600 493 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 IGSF9BQ9UPX0 1349 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
SPG11-217ENST00000559511 ZSCAN5CA6NGD5 496 aaPredicted RBP11.99□□□□□ -0.49
SPG11-217ENST00000559511 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms