RNA–Protein interactions for RNA: ENST00000559499.1

PCSK6-210, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 3,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-210ENST00000559499 TRIM58Q8NG06 486 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 FOXN3O00409 490 aaPredicted RBP16.8■□□□□ 0.28
PCSK6-210ENST00000559499 GYS2P54840 703 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 PPARDQ03181 441 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 ARHGEF19Q8IW93 802 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
PCSK6-210ENST00000559499 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
PCSK6-210ENST00000559499 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 SIX2Q9NPC8 291 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 GJB1P08034 283 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 SRGAP2CP0DJJ0 459 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
PCSK6-210ENST00000559499 LRRC71Q8N4P6 559 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 SLC20A1Q8WUM9 679 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 TSGA10Q9BZW7 698 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 ABCB6Q9NP58 842 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 MYO1AQ9UBC5 1043 aa16.8■□□□□ 0.28
PCSK6-210ENST00000559499 GGPS1O95749 300 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 HNRNPH3P31942 346 aaKnown RBP16.79■□□□□ 0.28
PCSK6-210ENST00000559499 EPHX2P34913 555 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 DRP2Q13474 957 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 SNRNP35Q16560 246 aaKnown RBP16.79■□□□□ 0.28
PCSK6-210ENST00000559499 TMEM132AQ24JP5 1023 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 TAS2R14Q9NYV8 317 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 DDX41Q9UJV9 622 aaKnown RBP16.79■□□□□ 0.28
PCSK6-210ENST00000559499 TBX20Q9UMR3 447 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 SASH3O75995 380 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 ADSSP30520 456 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 SFNP31947 248 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 OSTNP61366 133 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
PCSK6-210ENST00000559499 WHAMMP3Q1A5X7 153 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 HDAC7Q8WUI4 952 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 ZNF302Q9NR11 478 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 CYP26B1Q9NR63 512 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 DOCK5Q9H7D0 1870 aa16.79■□□□□ 0.28
PCSK6-210ENST00000559499 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 CC2D1AQ6P1N0 951 aaPredicted RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 DHX38Q92620 1227 aaKnown RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 GPRASP2Q96D09 838 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 NOP56O00567 594 aaKnown RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 ATMINO43313 823 aaPredicted RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 SLC26A4O43511 780 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 MXI1P50539 228 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 ASTE1Q2TB18 679 aaPredicted RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 C2CD6Q53TS8 623 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 MIS18BP1Q6P0N0 1132 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 OSBPL9Q96SU4 736 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 OSGEPQ9NPF4 335 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 PLCB1Q9NQ66 1216 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 KCNK3O14649 394 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 UBA1P22314 1058 aaKnown RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 NIPA1Q7RTP0 329 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 TMEM161BQ8NDZ6 487 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 TMEM206Q9H813 350 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 LUC7LQ9NQ29 371 aaKnown RBP16.78■□□□□ 0.28
PCSK6-210ENST00000559499 JRKLQ9Y4A0 524 aa16.78■□□□□ 0.28
PCSK6-210ENST00000559499 PFASO15067 1338 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 KRT5P13647 590 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 BIRC3Q13489 604 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 METTL13Q8N6R0 699 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 BORCS6Q96GS4 357 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 XPNPEP1Q9NQW7 623 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
PCSK6-210ENST00000559499 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.28
PCSK6-210ENST00000559499 ESYT3A0FGR9 886 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 TNNI1P19237 187 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 LIG4P49917 911 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 CDK17Q00537 523 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 LONRF2Q1L5Z9 754 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 LBX2Q6XYB7 198 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 VPS36Q86VN1 386 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 PDGFCQ9NRA1 345 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 KCND2Q9NZV8 630 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 SNX12Q9UMY4 172 aa16.77■□□□□ 0.27
PCSK6-210ENST00000559499 SSU72P8A0A1W2PR75 194 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 F8VZ95 297 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 KLHL7Q8IXQ5 586 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 APEX2Q9UBZ4 518 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCSK6-210ENST00000559499 CETN1Q12798 172 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 EMC2Q15006 297 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 HSDL1Q3SXM5 330 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
PCSK6-210ENST00000559499 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 AIPL1Q9NZN9 384 aa16.76■□□□□ 0.27
PCSK6-210ENST00000559499 OGFRQ9NZT2 677 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms