RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 IWS1Q96ST2 819 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 EDEM3Q9BZQ6 932 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 KIF9Q9HAQ2 790 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 EPHB6O15197 1021 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 DCTN3O75935 186 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 ITGA4P13612 1032 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 CD19P15391 556 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 NMT1P30419 496 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 ZNF844Q08AG5 666 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 BSPRYQ5W0U4 402 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 NAIF1Q69YI7 327 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 LONP2Q86WA8 852 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 TBC1D22AQ8WUA7 517 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 POMGNT1Q8WZA1 660 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 PAIP2BQ9ULR5 123 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 TMEM120BA0PK00 339 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 STAM2O75886 525 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 FSBPO95073 299 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ANP32DO95626 131 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 INPP1P49441 399 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 SPARCL1Q14515 664 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 PDCD2Q16342 344 aaPredicted RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 GRAMD4Q6IC98 578 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 FRMD5Q7Z6J6 570 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 PASD1Q8IV76 773 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 DYDC2Q96IM9 177 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ACCSQ96QU6 501 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 ARL2BPQ9Y2Y0 163 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 PCDHB4Q9Y5E5 795 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 RIMBP3CA6NJZ7 1639 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 RIMBP3BA6NNM3 1639 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 RIMBP3Q9UFD9 1639 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 hCG_2014768A0A024R1R8 64 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 FAM196BA6NMK8 535 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 MIF4GDA9UHW6 222 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 ZBTB5O15062 677 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 SKIP12755 728 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 CA8P35219 290 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 MXI1P50539 228 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 IRX1P78414 480 aaPredicted RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 SEMA3FQ13275 785 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 TRADDQ15628 312 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 PRPF38AQ8NAV1 312 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 SUPT20HQ8NEM7 779 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 STAMBPL1Q96FJ0 436 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 CFAP36Q96G28 342 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 SNF8Q96H20 258 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 REEP2Q9BRK0 252 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 CNOT8Q9UFF9 292 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 DYTNA2CJ06 578 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 KRT19P08727 400 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP3-210ENST00000559192 TEKT1Q969V4 418 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 EIF2AQ9BY44 585 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 DHX36Q9H2U1 1008 aaKnown RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 SPATA31A3Q5VYP0 1347 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 GYG2O15488 501 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 CLDN3O15551 220 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ESRRAP11474 423 aaPredicted RBP7.61□□□□□ -1.19
USP3-210ENST00000559192 KCNJ1P48048 391 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 TRIM59Q8IWR1 403 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 AGPAT1Q99943 283 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 PFDN4Q9NQP4 134 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 ANLNQ9NQW6 1124 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 DONSONQ9NYP3 566 aa7.61□□□□□ -1.19
USP3-210ENST00000559192 CCDC195A0A1B0GUA6 201 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 MYBL1P10243 752 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 KITP10721 976 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 VEGFAP15692 232 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 RASA3Q14644 834 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 PPP2R5DQ14738 602 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 WDR78Q5VTH9 848 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 OGFOD1Q8N543 542 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 TTC17Q96AE7 1141 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ERP44Q9BS26 406 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 KLHL11Q9NVR0 708 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ANKFY1Q9P2R3 1169 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 FMN2Q9NZ56 1722 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 FOXP2O15409 715 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 MAN1A2O60476 641 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 INHBAP08476 426 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 NQO1P15559 274 aaKnown RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 LIG4P49917 911 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 DMP1Q13316 513 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 MIIPQ5JXC2 388 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 TBC1D9BQ66K14 1250 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 ZNF571Q7Z3V5 609 aaPredicted RBP7.6□□□□□ -1.19
USP3-210ENST00000559192 RFX6Q8HWS3 928 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 KAT2BQ92831 832 aa7.6□□□□□ -1.19
USP3-210ENST00000559192 BTBD6Q96KE9 485 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms