RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ECM1Q16610 540 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TMCO2Q7Z6W1 182 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DIS3L2Q8IYB7 885 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DBF4BQ8NFT6 615 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZSCAN31Q96LW9 406 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC9A7Q96T83 725 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 LLPHQ9BRT6 129 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TEKT3Q9BXF9 490 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SAP130Q9H0E3 1048 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 FAM49AQ9H0Q0 323 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF576Q9H609 170 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 KCNMB3Q9NPA1 279 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SH2B1Q9NRF2 756 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DISC1Q9NRI5 854 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 GABBR1Q9UBS5 961 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DDX25Q9UHL0 483 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TCEAL9Q9UHQ7 104 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 PCDHA11Q9Y5I1 949 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 COL1A2P08123 1366 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 ABHD14A-ACY1A0A1B0GW23 586 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 TTC24A2A3L6 582 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 GHRP10912 638 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 GCFC2P16383 781 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 KLRC1P26715 233 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 WDR4P57081 412 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 RELBQ01201 579 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 GUCY1B3Q02153 619 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 PRKCEQ02156 737 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 GRIN2CQ14957 1233 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 RAB30Q15771 203 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 HERC6Q8IVU3 1022 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 HAS1Q92839 578 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 CDX2Q99626 313 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 KLF16Q9BXK1 252 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 BRMS1Q9HCU9 246 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 MSRAQ9UJ68 235 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 STXBP5LQ9Y2K9 1186 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 SAMM50Q9Y512 469 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 PCDHA2Q9Y5H9 948 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 CDY2AQ9Y6F7 541 aa6.78□□□□□ -1.32
CTDSPL2-204ENST00000558966 CUL9Q8IWT3 2517 aa6.77□□□□□ -1.32
CTDSPL2-204ENST00000558966 SMIM35A0A1B0GVV1 85 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 EML1O00423 815 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 CCNT1O60563 726 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 EFCAB14O75071 495 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 C22orf31O95567 290 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 CA3P07451 260 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 SFNP31947 248 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 KCNJ6P48051 423 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 JAK3P52333 1124 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 MRPS6P82932 125 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 IKBKEQ14164 716 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 LPIN1Q14693 890 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 ZNF484Q5JVG2 852 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 FBXO47Q5MNV8 452 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TRMT1LQ7Z2T5 733 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 MIER3Q7Z3K6 550 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 RDM1Q8NG50 284 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 HELQQ8TDG4 1101 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 MYLIPQ8WY64 445 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TNPO1Q92973 898 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 COL26A1Q96A83 441 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 IFIH1Q9BYX4 1025 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 AGO3Q9H9G7 860 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 UPF2Q9HAU5 1272 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 MEN1O00255 615 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TBX3O15119 743 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 GDF9O60383 454 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 STBD1O95210 358 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 GJB5O95377 273 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 RPLP2P05387 115 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 SPIRE1Q08AE8 756 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 PPP2R5CQ13362 524 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 TRIM29Q14134 588 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 Q6ZVU0 165 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 SPRED2Q7Z698 418 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 LINC01465Q8N7H1 131 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 SEPT8Q92599 483 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 C8orf76Q96K31 380 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 FAM167AQ96KS9 214 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 FAM20AQ96MK3 541 aa6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 NAP1L4Q99733 375 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-204ENST00000558966 C2orf49Q9BVC5 232 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms