RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ORC3Q9UBD5 711 aaPredicted RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CD207Q9UJ71 328 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 ARIH1Q9Y4X5 557 aaPredicted RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 PCDHB12Q9Y5F1 795 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 VWA8A3KMH1 1905 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CCDC194A0A1B0GVG4 234 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 C2orf71A6NGG8 1288 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 PRR33A8MZF0 331 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 OFD1O75665 1012 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 DDHD2O94830 711 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 GCFC2P16383 781 aaKnown RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 ZSCAN20P17040 1043 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 YWHABP31946 246 aaKnown RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 KRT2P35908 639 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 BCAR1P56945 870 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 CDC42EP1Q00587 391 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 LAMTOR4Q0VGL1 99 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 CTTNQ14247 550 aaKnown RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 ANKRD1Q15327 319 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 AMHR2Q16671 573 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 CSPP1Q1MSJ5 1256 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 HERC4Q5GLZ8 1057 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 AGMOQ6ZNB7 445 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 ZNF280BQ86YH2 543 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 IFNLR1Q8IU57 520 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 RNF135Q8IUD6 432 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 THNSL1Q8IYQ7 743 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 LRRC43Q8N309 656 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 MRPL43Q8N983 215 aaKnown RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 SMG8Q8ND04 991 aaKnown RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 NLRP7Q8WX94 980 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TMEM143Q96AN5 459 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TCF25Q9BQ70 676 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 GCOM2Q9BZD3 368 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TMEM60Q9H2L4 133 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 NRDE2Q9H7Z3 1164 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TLE6Q9H808 572 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 AAASQ9NRG9 546 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 AGPAT5Q9NUQ2 364 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 FAM105AQ9NUU6 356 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TBC1D13Q9NVG8 400 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 DNAJB4Q9UDY4 337 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 TCEAL9Q9UHQ7 104 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 CDH22Q9UJ99 828 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 USP15Q9Y4E8 981 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-209ENST00000558894 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
SMAD3-209ENST00000558894 MYH11P35749 1972 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 A0A087WWV3 80 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NT5C1B-RDH14C9J2C7 533 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 INPPL1O15357 1258 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 HOXA2O43364 376 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DCXO43602 365 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 TSPAN1O60635 241 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 LILRB3O75022 631 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 CLASP2O75122 1294 aaKnown RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 GALTP07902 379 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ALADP13716 330 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 SFPQP23246 707 aaKnown RBP eCLIP6.2□□□□□ -1.421e-6■■■□□ 17.7
SMAD3-209ENST00000558894 SSTR3P32745 418 aaPredicted RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ARL2P36404 184 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 RFC5P40937 340 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NDUFV1P49821 464 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DNM2P50570 870 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NEK4P51957 841 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 CYP4A11Q02928 519 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 MBTD1Q05BQ5 628 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 EMC2Q15006 297 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 LONRF3Q496Y0 759 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 C8orf34Q49A92 452 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 TPRNQ4KMQ1 711 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 PLPP4Q5VZY2 271 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NCAPH2Q6IBW4 605 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 PDE12Q6L8Q7 609 aaKnown RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ANKRD54Q6NXT1 300 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 FERMT3Q86UX7 667 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DIS3L2Q8IYB7 885 aaKnown RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 SLFN12Q8IYM2 578 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 RNF168Q8IYW5 571 aaPredicted RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 C4orf32Q8N8J7 132 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 RNF169Q8NCN4 708 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 GSTCDQ8NEC7 633 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ASAP3Q8TDY4 903 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 SLC22A17Q8WUG5 538 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 IGSF21Q96ID5 467 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NLRP4Q96MN2 994 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ZNF558Q96NG5 402 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 CDCA3Q99618 268 aaPredicted RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 NAP1L4Q99733 375 aaKnown RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 EIF2AK1Q9BQI3 630 aaKnown RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ZBP1Q9H171 429 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 ZSWIM4Q9H7M6 989 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 BMP2KQ9NSY1 1161 aaPredicted RBP6.2□□□□□ -1.42
SMAD3-209ENST00000558894 MIOSQ9NXC5 875 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 DACT1Q9NYF0 836 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 SPG21Q9NZD8 308 aa6.2□□□□□ -1.42
SMAD3-209ENST00000558894 MUTYHQ9UIF7 546 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms