RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
SMAD3-208ENST00000558827 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
SMAD3-208ENST00000558827 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 INO80B-WBP1J3KQ70 363 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 LIG1P18858 919 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 CDC25AP30304 524 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 LTBRP36941 435 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 NRIP1P48552 1158 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
SMAD3-208ENST00000558827 PTGDRQ13258 359 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 ECM1Q16610 540 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 PTCRAQ6ISU1 281 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-208ENST00000558827 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 APOL6Q9BWW8 343 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 CHST12Q9NRB3 414 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 FAM105AQ9NUU6 356 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-208ENST00000558827 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
SMAD3-208ENST00000558827 H3BQV1 296 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 HOXA2O43364 376 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 LYPLA2O95372 231 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 EOMESO95936 686 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 LAG3P18627 525 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 GLRA2P23416 452 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 HOXA11P31270 313 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-208ENST00000558827 CA8P35219 290 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 ARL2P36404 184 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
SMAD3-208ENST00000558827 CAPSQ13938 189 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
SMAD3-208ENST00000558827 LEXMQ3ZCV2 418 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 UBXN11Q5T124 520 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 SRGAP1Q7Z6B7 1085 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 PABPC5Q96DU9 382 aaKnown RBP13.92□□□□□ -0.18
SMAD3-208ENST00000558827 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 EIF2AQ9BY44 585 aaKnown RBP13.92□□□□□ -0.18
SMAD3-208ENST00000558827 TLE6Q9H808 572 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 AGPAT5Q9NUQ2 364 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 PCDHB2Q9Y5E7 798 aa13.92□□□□□ -0.18
SMAD3-208ENST00000558827 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 ASAP2O43150 1006 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 B4GALT5O43286 388 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMAD3-208ENST00000558827 DGAT1O75907 488 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 ERLIN2O94905 339 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.184e-6■■■□□ 18.9
SMAD3-208ENST00000558827 PTENP60484 403 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 IL17AQ16552 155 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 ERMNQ8TAM6 284 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■□□□ 12
SMAD3-208ENST00000558827 NACC1Q96RE7 527 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 PLIN2Q99541 437 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 LRWD1Q9UFC0 647 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 KIAA1024Q9UPX6 916 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 HES2Q9Y543 173 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 PPME1Q9Y570 386 aa13.91□□□□□ -0.18
SMAD3-208ENST00000558827 ARHGEF35A5YM69 484 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 HIDE1A8MVS5 230 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 B4GALT3O60512 393 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 TSPAN1O60635 241 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 TBX10O75333 385 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 OFD1O75665 1012 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 NDUFV1P49821 464 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 BCAR1P56945 870 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 ADAM15Q13444 863 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 TFDP1Q14186 410 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 MXD4Q14582 209 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 AGMOQ6ZNB7 445 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 SNX29Q8TEQ0 813 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 BSNDQ8WZ55 320 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 POLR3CQ9BUI4 534 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
SMAD3-208ENST00000558827 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-208ENST00000558827 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms