RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
PBX1-213ENST00000558796 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 H3BNC9 293 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 STX6O43752 255 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 TSPAN1O60635 241 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 ERLIN2O94905 339 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 POU3F3P20264 500 aaPredicted RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 BMPR1AP36894 532 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 PTENP60484 403 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 ARL6IP4Q66PJ3 421 aaKnown RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 KCNK18Q7Z418 384 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 ABI1Q8IZP0 508 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 HELQQ8TDG4 1101 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 LPPQ93052 612 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 CPB2Q96IY4 423 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
PBX1-213ENST00000558796 POLD4Q9HCU8 107 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
PBX1-213ENST00000558796 NCOR1O75376 2440 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 MEIS3P2A8K0S8 358 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 GRM6O15303 877 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 HOXA2O43364 376 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 BMP15O95972 392 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 CYP11B2P19099 503 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 GRIN1Q05586 938 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 MRPL38Q96DV4 380 aaKnown RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 PNMA5Q96PV4 448 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 RUSC1Q9BVN2 902 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 FAM105AQ9NUU6 356 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
PBX1-213ENST00000558796 DNM3Q9UQ16 869 aa12.2□□□□□ -0.46
PBX1-213ENST00000558796 TTC28Q96AY4 2481 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 C5orf42Q9H799 3197 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 B4GALT5O43286 388 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 EYA4O95677 639 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
PBX1-213ENST00000558796 LIG1P18858 919 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 HOXA11P31270 313 aaPredicted RBP12.19□□□□□ -0.46
PBX1-213ENST00000558796 RAB27AP51159 221 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 AMHR2Q16671 573 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 PTPROQ16827 1216 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 UBXN11Q5T124 520 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 CDCA2Q69YH5 1023 aaPredicted RBP12.19□□□□□ -0.46
PBX1-213ENST00000558796 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 CABP7Q86V35 215 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 COLGALT1Q8NBJ5 622 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 CWH43Q9H720 699 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 LMCD1Q9NZU5 365 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 INPP5FQ9Y2H2 1132 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 PCDHB2Q9Y5E7 798 aa12.19□□□□□ -0.46
PBX1-213ENST00000558796 HIP1RO75146 1068 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 EOMESO95936 686 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 ITGB1P05556 798 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 RB1P06400 928 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 SKIP12755 728 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 ARF4P18085 180 aaPredicted RBP12.18□□□□□ -0.46
PBX1-213ENST00000558796 MARCKSP29966 332 aaPredicted RBP12.18□□□□□ -0.46
PBX1-213ENST00000558796 PBX3P40426 434 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 POU5F1BQ06416 359 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 PTPAQ15257 358 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 TMEM119Q4V9L6 283 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 HYIQ5T013 277 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 NOTUMQ6P988 496 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
PBX1-213ENST00000558796 RASSF8Q8NHQ8 419 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 EIF2AQ9BY44 585 aaKnown RBP12.18□□□□□ -0.46
PBX1-213ENST00000558796 NT5C3AQ9H0P0 336 aa12.18□□□□□ -0.46
PBX1-213ENST00000558796 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
PBX1-213ENST00000558796 EDN1P05305 212 aa12.17□□□□□ -0.46
PBX1-213ENST00000558796 PRKCBP05771 671 aa12.17□□□□□ -0.46
PBX1-213ENST00000558796 LAG3P18627 525 aa12.17□□□□□ -0.46
PBX1-213ENST00000558796 DNAJB1P25685 340 aa12.17□□□□□ -0.46
PBX1-213ENST00000558796 AXLP30530 894 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms