RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 PSMA5P28066 241 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 DRP2Q13474 957 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 LRCH2Q5VUJ6 765 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 CCDC149Q6ZUS6 474 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 OTOP3Q7RTS5 596 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 EMILIN2Q9BXX0 1053 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 GBP3Q9H0R5 595 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 TBC1D13Q9NVG8 400 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 CFAP54Q96N23 3096 aa17.23■□□□□ 0.35
CPNE6-208ENST00000558795 FAM186AA6NE01 2351 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
CPNE6-208ENST00000558795 A0A087WZ62 844 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 GALTP07902 379 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 RAB27AP51159 221 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 TARBP2Q15633 366 aaKnown RBP17.22■□□□□ 0.35
CPNE6-208ENST00000558795 XKR3Q5GH77 459 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 GPR149Q86SP6 731 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 SLC5A5Q92911 643 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 FDXACB1Q9BRP7 624 aaPredicted RBP17.22■□□□□ 0.35
CPNE6-208ENST00000558795 UNC45AQ9H3U1 944 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 STK39Q9UEW8 545 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 FBXL21Q9UKT6 434 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
CPNE6-208ENST00000558795 KLRC2P26717 231 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 USP11P51784 963 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 TDGQ13569 410 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 CWF19L1Q69YN2 538 aaKnown RBP17.21■□□□□ 0.35
CPNE6-208ENST00000558795 CATSPER4Q7RTX7 472 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 ZNF410Q86VK4 478 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 RHPN2Q8IUC4 686 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 RDM1Q8NG50 284 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 URGCPQ8TCY9 931 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 BCL7CQ8WUZ0 217 aaPredicted RBP17.21■□□□□ 0.35
CPNE6-208ENST00000558795 PHKBQ93100 1093 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 PGBD4Q96DM1 585 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
CPNE6-208ENST00000558795 NIFKQ9BYG3 293 aaKnown RBP17.21■□□□□ 0.35
CPNE6-208ENST00000558795 DNAJB4Q9UDY4 337 aa17.21■□□□□ 0.35
CPNE6-208ENST00000558795 OFD1O75665 1012 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 SSBP05455 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
CPNE6-208ENST00000558795 AOC1P19801 751 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 SLC11A1P49279 550 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
CPNE6-208ENST00000558795 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 Q6ZUG5 572 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 ADSSL1Q8N142 457 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 BRF1Q92994 677 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
CPNE6-208ENST00000558795 SUCLA2Q9P2R7 463 aaPredicted RBP17.2■□□□□ 0.34
CPNE6-208ENST00000558795 IGKV6-21A0A0C4DH24 114 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 TMEM150BA6NC51 233 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 ZNF623O75123 536 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 CLCN4P51793 760 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 CCDC105Q8IYK2 499 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 GJA10Q969M2 543 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
CPNE6-208ENST00000558795 RTP3Q9BQQ7 232 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 SH2D3AQ9BRG2 576 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 DUSP12Q9UNI6 340 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 C2orf16Q68DN1 1984 aa17.19■□□□□ 0.34
CPNE6-208ENST00000558795 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 PSMD10O75832 226 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 CPA1P15085 419 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 C15orf39Q6ZRI6 1047 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 ZNF280BQ86YH2 543 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 SIX5Q8N196 739 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 FEZF2Q8TBJ5 459 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
CPNE6-208ENST00000558795 VN1R3Q9BXE9 311 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 SLC26A6Q9BXS9 759 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 RNF26Q9BY78 433 aaPredicted RBP17.18■□□□□ 0.34
CPNE6-208ENST00000558795 KCNK12Q9HB15 430 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
CPNE6-208ENST00000558795 PCDHB2Q9Y5E7 798 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
CPNE6-208ENST00000558795 NID2Q14112 1375 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 STK25O00506 426 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 PI15O43692 258 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
CPNE6-208ENST00000558795 ALDH2P05091 517 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 CNPP09543 421 aaKnown RBP17.17■□□□□ 0.34
CPNE6-208ENST00000558795 NPR3P17342 541 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 RFX1P22670 979 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 ID4P47928 161 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 NLRP5P59047 1200 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 ANGPT1Q15389 498 aa17.17■□□□□ 0.34
CPNE6-208ENST00000558795 Q4G0T1 1027 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms