RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
SPG11-212ENST00000558790 ZBTB39O15060 712 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 CYP21A2P08686 494 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPG11-212ENST00000558790 HYAL1Q12794 435 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 TROAPQ12815 778 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 LPIN1Q14693 890 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 VWA5B2Q8N398 1253 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
SPG11-212ENST00000558790 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
SPG11-212ENST00000558790 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 STIM2Q9P246 746 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
SPG11-212ENST00000558790 CEP250Q9BV73 2442 aa11.1□□□□□ -0.63
SPG11-212ENST00000558790 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 PRR23AA6NEV1 266 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 TMEM221A6NGB7 291 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 H0Y858 1186 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 M0R296 226 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 LINC01565O15544 149 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 ICMTO60725 284 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 MMP1P03956 469 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 GSPT1P15170 499 aaKnown RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 MARK3P27448 753 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 TCF7P36402 384 aaPredicted RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 BMPR1AP36894 532 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 TRDNQ13061 729 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 WTAPQ15007 396 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 SMAD2Q15796 467 aaKnown RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 LINC01599Q8WXQ3 324 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 GTPBP3Q969Y2 492 aaKnown RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 SENP7Q9BQF6 1050 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 ZCCHC2Q9C0B9 1178 aaKnown RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 LMAN2LQ9H0V9 348 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 GZF1Q9H116 711 aaPredicted RBP11.09□□□□□ -0.63
SPG11-212ENST00000558790 TLR9Q9NR96 1032 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 EGFL7Q9UHF1 273 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 TUBE1Q9UJT0 475 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
SPG11-212ENST00000558790 MYO10Q9HD67 2058 aa11.08□□□□□ -0.63
SPG11-212ENST00000558790 ERICH2A1L162 156 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 TGFBR3LH3BV60 316 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 MEIS2O14770 477 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 MBTPS2O43462 519 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 NCK2O43639 380 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 RB1P06400 928 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 KCNA2P16389 499 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 ANTXR2P58335 489 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 PTH1RQ03431 593 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 AAMPQ13685 434 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 UBAP2LQ14157 1087 aaKnown RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 BTG3Q14201 252 aaPredicted RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 GRIK4Q16099 956 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 BMP8AQ7Z5Y6 402 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 RALYLQ86SE5 291 aaKnown RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 NLRP8Q86W28 1048 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 EDAQ92838 391 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 ZNF689Q96CS4 500 aaPredicted RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 ZBTB10Q96DT7 871 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 POP1Q99575 1024 aaKnown RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 MYL10Q9BUA6 226 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
SPG11-212ENST00000558790 CDY2AQ9Y6F7 541 aa11.08□□□□□ -0.64
SPG11-212ENST00000558790 DCDC2BA2VCK2 349 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
SPG11-212ENST00000558790 E7EWF7 191 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 ATP9AO75110 1047 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 DNAJB1P25685 340 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 CAMK1Q14012 370 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
SPG11-212ENST00000558790 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 CATIPQ7Z7H3 387 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 ATCAYQ86WG3 371 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 TREML1Q86YW5 311 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 MB21D2Q8IYB1 491 aaPredicted RBP11.07□□□□□ -0.64
SPG11-212ENST00000558790 DNAJB3Q8WWF6 145 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 CUL5Q93034 780 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 AGO3Q9H9G7 860 aaKnown RBP11.07□□□□□ -0.64
SPG11-212ENST00000558790 ERAP1Q9NZ08 941 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
SPG11-212ENST00000558790 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
SPG11-212ENST00000558790 GSTTP1A0A1W2PQM5 241 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 ENPP3O14638 875 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 DGKIO75912 1065 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms