RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PLA2G4BP0C869 781 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 PLCG1P19174 1290 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 SFPQP23246 707 aaKnown RBP eCLIP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 HOXA11P31270 313 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 MBTD1Q05BQ5 628 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 DAW1Q8N136 415 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 MAFAQ8NHW3 353 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
TSPAN3-205ENST00000558745 CHD9Q3L8U1 2897 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 MEIS3P2A8K0S8 358 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 B4GALT5O43286 388 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 HIP1RO75146 1068 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 BRD1O95696 1058 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 STAG3L1P0CL83 205 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 LIG1P18858 919 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 IGFBP4P22692 258 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 PHKA2P46019 1235 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 SLC12A3P55017 1021 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 TFDP1Q14186 410 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 BTG3Q14201 252 aaPredicted RBP15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 MCM6Q14566 821 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 TWF2Q6IBS0 349 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 FIBCD1Q8N539 461 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 SYT2Q8N9I0 419 aaPredicted RBP15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 LPPQ93052 612 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 TGS1Q96RS0 853 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
TSPAN3-205ENST00000558745 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 SPTLC2O15270 562 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 TSPAN1O60635 241 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 FOSL2P15408 326 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 ATF7P17544 494 aaPredicted RBP15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 ERVK-21P61565 698 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 MAPK7Q13164 816 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 BECN1Q14457 450 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 AMHR2Q16671 573 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 UBXN11Q5T124 520 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 KRI1Q8N9T8 703 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 RASSF8Q8NHQ8 419 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 CCSER1Q9C0I3 900 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 CHST12Q9NRB3 414 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 AGPAT5Q9NUQ2 364 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 PRUNE2Q8WUY3 3088 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
TSPAN3-205ENST00000558745 A0A087X0B3 334 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 A0A0U1RQF3 1178 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 LPXNO60711 386 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 EDN1P05305 212 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 PEX3P56589 373 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 POU5F1BQ06416 359 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 ZNF598Q86UK7 904 aaKnown RBP15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 RAD54LQ92698 747 aa15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
TSPAN3-205ENST00000558745 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 ERLIN2O94905 339 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 CCDC85BQ15834 202 aaPredicted RBP15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 CLLU1OSQ5K130 101 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 HELQQ8TDG4 1101 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 CASD1Q96PB1 797 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 GAS2L1Q99501 681 aaPredicted RBP15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 ELAC1Q9H777 363 aaKnown RBP15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 TYW1Q9NV66 732 aaKnown RBP15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 PCDHB2Q9Y5E7 798 aa15.29■□□□□ 0.04
TSPAN3-205ENST00000558745 MYH15Q9Y2K3 1946 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 DDIT3P35638 169 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 NAMPTP43490 491 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 NPTX2P47972 431 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 NAALADL2Q58DX5 795 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 RRAGBQ5VZM2 374 aa15.28■□□□□ 0.04
TSPAN3-205ENST00000558745 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms