RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 SLC39A11Q8N1S5 342 aa17.38■□□□□ 0.37
TPM1-211ENST00000558314 HAS1Q92839 578 aa17.38■□□□□ 0.37
TPM1-211ENST00000558314 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
TPM1-211ENST00000558314 NGRNQ9NPE2 291 aaKnown RBP17.38■□□□□ 0.37
TPM1-211ENST00000558314 MEIS3P2A8K0S8 358 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 ZBTB39O15060 712 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 YWHABP31946 246 aaKnown RBP17.37■□□□□ 0.37
TPM1-211ENST00000558314 TRIM29Q14134 588 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 SMC1AQ14683 1233 aaKnown RBP17.37■□□□□ 0.37
TPM1-211ENST00000558314 EPHA7Q15375 998 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 ME3Q16798 604 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 OTUD6AQ7L8S5 288 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
TPM1-211ENST00000558314 PSPC1Q8WXF1 523 aaKnown RBP17.37■□□□□ 0.37
TPM1-211ENST00000558314 AUTS2Q8WXX7 1259 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
TPM1-211ENST00000558314 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 FAM105AQ9NUU6 356 aa17.37■□□□□ 0.37
TPM1-211ENST00000558314 JAK2O60674 1132 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 CXCL14O95715 111 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 SKIP12755 728 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
TPM1-211ENST00000558314 NEK4P51957 841 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 ANAPC15P60006 121 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
TPM1-211ENST00000558314 EMC2Q15006 297 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 CALCRLQ16602 461 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 NOMO2Q5JPE7 1267 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 ANKRD54Q6NXT1 300 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 SLFN12Q8IYM2 578 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 VPS52Q8N1B4 723 aa17.36■□□□□ 0.37
TPM1-211ENST00000558314 PHF7Q9BWX1 381 aaPredicted RBP17.36■□□□□ 0.37
TPM1-211ENST00000558314 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.35■□□□□ 0.37
TPM1-211ENST00000558314 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 TBX3O15119 743 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 RFC5P40937 340 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 RAB27AP51159 221 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 ZBTB33Q86T24 672 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 MTRQ99707 1265 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 ZSWIM4Q9H7M6 989 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 IFT122Q9HBG6 1241 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 TBC1D13Q9NVG8 400 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 CDH22Q9UJ99 828 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
TPM1-211ENST00000558314 A0A087WWV3 80 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 BTBD18B2RXH4 712 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 ERLIN2O94905 339 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 SSBP05455 408 aaKnown RBP eCLIP17.34■□□□□ 0.37
TPM1-211ENST00000558314 TXKP42681 527 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 CBX2Q14781 532 aaPredicted RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 HERC4Q5GLZ8 1057 aaPredicted RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 HFE2Q6ZVN8 426 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 TMEM173Q86WV6 379 aaPredicted RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 C4orf19Q8IY42 314 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 DIS3L2Q8IYB7 885 aaKnown RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 EXOC8Q8IYI6 725 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 NSUN7Q8NE18 718 aaKnown RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 URGCPQ8TCY9 931 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 TCP11Q8WWU5 503 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 CASP10Q92851 521 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
TPM1-211ENST00000558314 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 DNAJB4Q9UDY4 337 aa17.34■□□□□ 0.37
TPM1-211ENST00000558314 C2orf71A6NGG8 1288 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 LOC730098B7Z3J9 87 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 CLASP2O75122 1294 aaKnown RBP17.33■□□□□ 0.36
TPM1-211ENST00000558314 OFD1O75665 1012 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 POMCP01189 267 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 WEE2P0C1S8 567 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 SRGAP1Q7Z6B7 1085 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
TPM1-211ENST00000558314 APOL6Q9BWW8 343 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 AGPAT5Q9NUQ2 364 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 PCDHA12Q9UN75 941 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.36
TPM1-211ENST00000558314 INO80B-WBP1J3KQ70 363 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 NEMFO60524 1076 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 SLC11A1P49279 550 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 RARS2Q5T160 578 aaKnown RBP17.32■□□□□ 0.36
TPM1-211ENST00000558314 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 ZNF280BQ86YH2 543 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 C12orf76Q8N812 135 aaPredicted RBP17.32■□□□□ 0.36
TPM1-211ENST00000558314 BCL7CQ8WUZ0 217 aaPredicted RBP17.32■□□□□ 0.36
TPM1-211ENST00000558314 EDAQ92838 391 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 IGSF21Q96ID5 467 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 CPB2Q96IY4 423 aa17.32■□□□□ 0.36
TPM1-211ENST00000558314 S1PR5Q9H228 398 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms