RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 A0A1B0GVL5 298 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 TREHO43280 583 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 B4GALT4O60513 344 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 LYPLA2O95372 231 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 GNAT1P11488 350 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 PLCG1P19174 1290 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 KLRC1P26715 233 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 CDK7P50613 346 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 TLE2Q04725 743 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 USP4Q13107 963 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 PTGISQ16647 500 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 SLC43A3Q8NBI5 491 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
HMGB1P8-201ENST00000558211 A0A087X0B3 334 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 ARHGEF35A5YM69 484 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 DCDC2CA8MYV0 355 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 PRPF40AO75400 957 aaKnown RBP13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 CYP2C9P11712 490 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 MUTP22033 750 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 PTPN11Q06124 597 aaPredicted RBP13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 HYIQ5T013 277 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 SESTD1Q86VW0 696 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 DPF3Q92784 378 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 DHX58Q96C10 678 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 GBP4Q96PP9 640 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 BHMT2Q9H2M3 363 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 SUGCTQ9HAC7 445 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 TUBE1Q9UJT0 475 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 MROH7Q68CQ1 1323 aa13.37□□□□□ -0.27
HMGB1P8-201ENST00000558211 COL1A2P08123 1366 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 EYA4O95677 639 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 CMA1P23946 247 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 STAT6P42226 847 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 RARRES1P49788 294 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 SNX17Q15036 470 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 RETREG2Q8NC44 543 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 LRRC15Q8TF66 581 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 HTATIP2Q9BUP3 242 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 TRAIPQ9BWF2 469 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 GMPR2Q9P2T1 348 aaKnown RBP13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
HMGB1P8-201ENST00000558211 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 A0A1W2PQ27 194 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 A0A1W2PQ64 194 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 SLC26A4O43511 780 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 PFKFB1P16118 471 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 CLCN3P51790 818 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 ADAM17P78536 824 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 NCOA4Q13772 614 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 C1orf53Q5VUE5 145 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 RUFY4Q6ZNE9 571 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 MRPS27Q92552 414 aaKnown RBP13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 RAD54LQ92698 747 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 PBXIP1Q96AQ6 731 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 ZFP42Q96MM3 310 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 GOLPH3LQ9H4A5 285 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 DBR1Q9UK59 544 aaKnown RBP13.35□□□□□ -0.27
HMGB1P8-201ENST00000558211 MAGEB2O15479 319 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms