RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 RINT1Q6NUQ1 792 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 NOTUMQ6P988 496 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 KCNK18Q7Z418 384 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 RTN4RL1Q86UN2 441 aaPredicted RBP9.93□□□□□ -0.82
SPG11-207ENST00000558138 HACE1Q8IYU2 909 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 KCNG4Q8TDN1 519 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 PPM1EQ8WY54 764 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 PGBD4Q96DM1 585 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 CPB2Q96IY4 423 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 EPSTI1Q96J88 318 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 PNMA5Q96PV4 448 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 MMTAG2Q9BU76 263 aaKnown RBP9.93□□□□□ -0.82
SPG11-207ENST00000558138 RUSC1Q9BVN2 902 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 IFT122Q9HBG6 1241 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 AGPAT5Q9NUQ2 364 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 FBXO2Q9UK22 296 aaPredicted RBP9.93□□□□□ -0.82
SPG11-207ENST00000558138 RWDD3Q9Y3V2 267 aa9.93□□□□□ -0.82
SPG11-207ENST00000558138 LINC01553A4QN01 128 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 C9IYK1 514 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 FAM13AO94988 1023 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PRKCBP05771 671 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 FGFR1P11362 822 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 AXLP30530 894 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 MATR3P43243 847 aaKnown RBP eCLIP9.92□□□□□ -0.82
SPG11-207ENST00000558138 NASPP49321 788 aaPredicted RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 GATMP50440 423 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 SMTNP53814 917 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PEX3P56589 373 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PTENP60484 403 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 KRT85P78386 507 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 HTRA4P83105 476 aaPredicted RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 RNASELQ05823 741 aaKnown RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 PRPF4BQ13523 1007 aaKnown RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 MCM6Q14566 821 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PCBP1Q15365 356 aaKnown RBP eCLIP9.92□□□□□ -0.82
SPG11-207ENST00000558138 MAPK6Q16659 721 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 HYIQ5T013 277 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 ATL3Q6DD88 541 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 CCDC73Q6ZRK6 1079 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 ECHDC2Q86YB7 292 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 CMTR2Q8IYT2 770 aaKnown RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 PDILTQ8N807 584 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 SYT2Q8N9I0 419 aaPredicted RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 LINC00301Q8NCQ3 95 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 GDPD5Q8WTR4 605 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 LARP4BQ92615 738 aaKnown RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 RAD54LQ92698 747 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 SAMD11Q96NU1 681 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 ADPGKQ9BRR6 497 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 KIFC3Q9BVG8 833 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 TIPINQ9BVW5 301 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 APOL6Q9BWW8 343 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PANK2Q9BZ23 570 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 MINDY3Q9H8M7 445 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 KMT5AQ9NQR1 393 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 PRMT7Q9NVM4 692 aaPredicted RBP9.92□□□□□ -0.82
SPG11-207ENST00000558138 TMEM161AQ9NX61 479 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 INPP5FQ9Y2H2 1132 aa9.92□□□□□ -0.82
SPG11-207ENST00000558138 NPHP3-ACAD11A0A0J9YXS1 232 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 SFI1A8K8P3 1242 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 RFXAPO00287 272 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 TSPAN1O60635 241 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 CUTAO60888 179 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 PPP6R2O75170 966 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 DGKIO75912 1065 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 NPTXRO95502 500 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 ITGA4P13612 1032 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 EFNA5P52803 228 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 NUCB2P80303 420 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 MBTD1Q05BQ5 628 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 STRN3Q13033 797 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 DSC3Q14574 896 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
SPG11-207ENST00000558138 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
SPG11-207ENST00000558138 TMEM192Q8IY95 271 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 BSNDQ8WZ55 320 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 BICD1Q96G01 975 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 SPATA32Q96LK8 384 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 C17orf80Q9BSJ5 609 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 CCSER1Q9C0I3 900 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 ELAC1Q9H777 363 aaKnown RBP9.91□□□□□ -0.82
SPG11-207ENST00000558138 FAM105AQ9NUU6 356 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 KCND2Q9NZV8 630 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 KCNG1Q9UIX4 513 aa9.91□□□□□ -0.82
SPG11-207ENST00000558138 PHLPP2Q6ZVD8 1323 aa9.9□□□□□ -0.82
SPG11-207ENST00000558138 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms