RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GLRA2P23416 452 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 MYL5Q02045 173 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 MAPK6Q16659 721 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 MARCH8Q5T0T0 291 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 ISM2Q6H9L7 571 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
TPM1-209ENST00000558072 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 EPM2AIP1Q7L775 607 aaPredicted RBP13.64□□□□□ -0.23
TPM1-209ENST00000558072 RHPN2Q8IUC4 686 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 SLC43A3Q8NBI5 491 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 KIAA0895Q8NCT3 520 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 P2RX5Q93086 422 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 WNT8BQ93098 351 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
TPM1-209ENST00000558072 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 SCLT1Q96NL6 688 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
TPM1-209ENST00000558072 GPRC5CQ9NQ84 441 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 MYH11P35749 1972 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 SIP14410 1827 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 DENND3A2RUS2 1198 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 GNA14O95837 355 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 CLCN3P51790 818 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 FKBP3Q00688 224 aaKnown RBP13.63□□□□□ -0.23
TPM1-209ENST00000558072 SPAG1Q07617 926 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 DRP2Q13474 957 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 PTGISQ16647 500 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 NFIL3Q16649 462 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 EDRF1Q3B7T1 1238 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 CDCA2Q69YH5 1023 aaPredicted RBP13.63□□□□□ -0.23
TPM1-209ENST00000558072 SLFN12LQ6IEE8 588 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 TMEM161BQ8NDZ6 487 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 TMEM174Q8WUU8 243 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
TPM1-209ENST00000558072 TYW1Q9NV66 732 aaKnown RBP13.63□□□□□ -0.23
TPM1-209ENST00000558072 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
TPM1-209ENST00000558072 TBC1D7Q9P0N9 293 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 TRAF3IP3Q9Y228 551 aa13.63□□□□□ -0.23
TPM1-209ENST00000558072 SLC16A4O15374 487 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 TREHO43280 583 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 PPP1R37O75864 691 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 TPM2P07951 284 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 COL6A1P12109 1028 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 BMP6P22004 513 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 NMT1P30419 496 aaKnown RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 CRYBB1P53674 252 aaPredicted RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 PTENP60484 403 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 BFSP2Q13515 415 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 CAPSQ13938 189 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 GSE1Q14687 1217 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 KYAT1Q16773 422 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 FAM187BQ17R55 369 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 LRRC26Q2I0M4 334 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 KLHL10Q6JEL2 608 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 ZPBP2Q6X784 338 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 MAP4K3Q8IVH8 894 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 ASAP3Q8TDY4 903 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 SCFD1Q8WVM8 642 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 TOX2Q96NM4 488 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
TPM1-209ENST00000558072 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 SQORQ9Y6N5 450 aa13.62□□□□□ -0.23
TPM1-209ENST00000558072 CETN3O15182 167 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 B4GALT4O60513 344 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
TPM1-209ENST00000558072 AXLP30530 894 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 GPC3P51654 580 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
TPM1-209ENST00000558072 NECAB2Q7Z6G3 386 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 USP37Q86T82 979 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
TPM1-209ENST00000558072 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
TPM1-209ENST00000558072 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
TPM1-209ENST00000558072 BICD1Q96G01 975 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms