RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KCND2Q9NZV8 630 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 KCNH3Q9ULD8 1083 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 MYMKA6NI61 221 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 ERLIN2O94905 339 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 FAM13AO94988 1023 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 MYOGP15173 224 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 PFKFB1P16118 471 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
USP3-205ENST00000557884 CMA1P23946 247 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 NAMPTP43490 491 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 NPTX2P47972 431 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
USP3-205ENST00000557884 POU5F1BQ06416 359 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 DMP1Q13316 513 aaPredicted RBP15.84■□□□□ 0.13
USP3-205ENST00000557884 GIT2Q14161 759 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 CDCA2Q69YH5 1023 aaPredicted RBP15.84■□□□□ 0.13
USP3-205ENST00000557884 IFNLR1Q8IU57 520 aaPredicted RBP15.84■□□□□ 0.13
USP3-205ENST00000557884 FSIP1Q8NA03 581 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 IQUBQ8NA54 791 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 PBX4Q9BYU1 374 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 C2orf40Q9H1Z8 148 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 SZT2Q5T011 3432 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
USP3-205ENST00000557884 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.83■□□□□ 0.12
USP3-205ENST00000557884 B4GALT5O43286 388 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 TLL1O43897 1013 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 TSPAN1O60635 241 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
USP3-205ENST00000557884 GJB5O95377 273 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 PLS3P13797 630 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 AMHR2Q16671 573 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 TWF2Q6IBS0 349 aaKnown RBP15.83■□□□□ 0.12
USP3-205ENST00000557884 DDX12PQ92771 950 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 TOP1MTQ969P6 601 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 CPB2Q96IY4 423 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 NFKBIZQ9BYH8 718 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 GOLPH3LQ9H4A5 285 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 KMT5AQ9NQR1 393 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 RGS18Q9NS28 235 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 USP20Q9Y2K6 914 aa15.83■□□□□ 0.12
USP3-205ENST00000557884 YBX2Q9Y2T7 364 aaKnown RBP15.83■□□□□ 0.12
USP3-205ENST00000557884 SLC16A4O15374 487 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 PRKCBP05771 671 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 DNAJB2P25686 324 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 HOXA11P31270 313 aaPredicted RBP15.82■□□□□ 0.12
USP3-205ENST00000557884 SARSP49591 514 aaKnown RBP15.82■□□□□ 0.12
USP3-205ENST00000557884 FXR1P51114 621 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP3-205ENST00000557884 NDUFA8P51970 172 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 SLC24A5Q71RS6 500 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 MYCT1Q8N699 235 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 RNF169Q8NCN4 708 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 MRPS27Q92552 414 aaKnown RBP15.82■□□□□ 0.12
USP3-205ENST00000557884 NKX2-4Q9H2Z4 354 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 PARVGQ9HBI0 331 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 C1orf112Q9NSG2 853 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 MSRAQ9UJ68 235 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 LRFN2Q9ULH4 789 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 ODF2LQ9ULJ1 636 aa15.82■□□□□ 0.12
USP3-205ENST00000557884 A0A1W2PQ27 194 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 A0A1W2PQ64 194 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 A0A1W2PQD8 194 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 LCHNA4D1U4 455 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 GOLGA6L4A6NEF3 574 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 C9IYK1 514 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 EDN1P05305 212 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 GATMP50440 423 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 ZNF131P52739 623 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 EFNA5P52803 228 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 RAB30Q15771 203 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 MAPK6Q16659 721 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 CDR2LQ86X02 465 aaPredicted RBP15.81■□□□□ 0.12
USP3-205ENST00000557884 NPAS4Q8IUM7 802 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 GRAMD1CQ8IYS0 662 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 SPIRE2Q8WWL2 714 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 TIFAQ96CG3 184 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 YME1L1Q96TA2 773 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 RAD9AQ99638 391 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 CCDC113Q9H0I3 377 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 FZD8Q9H461 694 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 C17orf75Q9HAS0 396 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 CHST12Q9NRB3 414 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 PRMT7Q9NVM4 692 aaPredicted RBP15.81■□□□□ 0.12
USP3-205ENST00000557884 DACT1Q9NYF0 836 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 SERTAD1Q9UHV2 236 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 HPSEQ9Y251 543 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 PCDHB7Q9Y5E2 793 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 PCDHA11Q9Y5I1 949 aa15.81■□□□□ 0.12
USP3-205ENST00000557884 TTLL13PA6NNM8 815 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 ACTN4O43707 911 aaKnown RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 ARHGEF15O94989 841 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 CA3P07451 260 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 IDEP14735 1019 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 ARF4P18085 180 aaPredicted RBP15.8■□□□□ 0.12
USP3-205ENST00000557884 CASP1P29466 404 aa15.8■□□□□ 0.12
USP3-205ENST00000557884 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms