RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 KIRREL1Q96J84 757 aa6.63□□□□□ -1.35
HNRNPC-233ENST00000557768 DEFB118Q96PH6 123 aa6.63□□□□□ -1.35
HNRNPC-233ENST00000557768 TMEM59LQ9UK28 342 aa6.63□□□□□ -1.35
HNRNPC-233ENST00000557768 NR2E3Q9Y5X4 410 aa6.63□□□□□ -1.35
HNRNPC-233ENST00000557768 MYH1P12882 1939 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 MAST2Q6P0Q8 1798 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 RFX7Q2KHR2 1363 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 SALL1Q9NSC2 1324 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 DDTLA6NHG4 134 aaPredicted RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 TRIM75PA6NK02 468 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 TNPO2O14787 897 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 ERVFC1P60507 584 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 PICALMQ13492 652 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 LONRF2Q1L5Z9 754 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 SLC10A6Q3KNW5 377 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 FASTKD5Q7L8L6 764 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 TMC3Q7Z5M5 1100 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 PPFIBP1Q86W92 1011 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 PRPF38AQ8NAV1 312 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 MFSD3Q96ES6 412 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 CEP89Q96ST8 783 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 MKRN2Q9H000 416 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 EPN3Q9H201 632 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 TYW1Q9NV66 732 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 STAP2Q9UGK3 403 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 AFG3L2Q9Y4W6 797 aa6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 LRRFIP2Q9Y608 721 aaKnown RBP6.62□□□□□ -1.35
HNRNPC-233ENST00000557768 COL6A3P12111 3177 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 GAKO14976 1311 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 ZNF521Q96K83 1311 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 C9IYK1 514 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 AGRPO00253 132 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 ENTPD3O75355 529 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 CIAO1O76071 339 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 UBTFL1P0CB47 393 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 RAC2P15153 192 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 ZC3H12BQ5HYM0 836 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 CT47A1Q5JQC4 288 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 TREML2Q5T2D2 321 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 TDRD10Q5VZ19 366 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 DZIP1Q86YF9 867 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 ANKRD13CQ8N6S4 541 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 DIS3LQ8TF46 1054 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 NINJ1Q92982 152 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 PAWRQ96IZ0 340 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 IDI2Q9BXS1 227 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 DDX4Q9NQI0 724 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 ABCF2Q9UG63 623 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 DENND2AQ9ULE3 1009 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 PA2G4Q9UQ80 394 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 LAMA3Q16787 3333 aa6.61□□□□□ -1.35
HNRNPC-233ENST00000557768 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 CTNND1O60716 968 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 IL15P40933 162 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 BTDP43251 543 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 TIMM10P62072 90 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 SV2CQ496J9 727 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 TM4SF20Q53R12 229 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 KLHL6Q8WZ60 621 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 COA7Q96BR5 231 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 LIN37Q96GY3 246 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 IPO9Q96P70 1041 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 CDC6Q99741 560 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 HDAC8Q9BY41 377 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 PRDM14Q9GZV8 571 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.6□□□□□ -1.352e-34■■□□□ 11.9
HNRNPC-233ENST00000557768 FBXL21Q9UKT6 434 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 ZNF214Q9UL59 606 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 AGTPBP1Q9UPW5 1226 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 ATP8A1Q9Y2Q0 1164 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 SLC45A1Q9Y2W3 748 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 MYH8P13535 1937 aa6.6□□□□□ -1.35
HNRNPC-233ENST00000557768 MROH7-TTC4A0A0A0MT08 1334 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 ZNFX1Q9P2E3 1918 aaKnown RBP6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 LRRC10BA6NIK2 292 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 MEIS1O00470 390 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 SHOXO15266 292 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 GLI1P08151 1106 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 L1CAMP32004 1257 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 TRHRP34981 398 aaPredicted RBP6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 TEKQ02763 1124 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 MECOMQ03112 1051 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 SPP2Q13103 211 aa6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 PABPC4Q13310 644 aaKnown RBP eCLIP6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 RRP1BQ14684 758 aaKnown RBP6.59□□□□□ -1.35
HNRNPC-233ENST00000557768 MLANAQ16655 118 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms