RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 CALML3P27482 149 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 CTGFP29279 349 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 STAT3P40763 770 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 RPS6P62753 249 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 ERVK-24P63145 666 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 PABPC4Q13310 644 aaKnown RBP eCLIP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 TRIM29Q14134 588 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 ECM1Q16610 540 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 INF2Q27J81 1249 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 GALNT17Q6IS24 598 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 PIK3AP1Q6ZUJ8 805 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 BRAPQ7Z569 592 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 VSIG10LQ86VR7 867 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 MB21D1Q8N884 522 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 SYTL5Q8TDW5 730 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 CCDC12Q8WUD4 166 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 CUL5Q93034 780 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 TRIM56Q9BRZ2 755 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 ANO3Q9BYT9 981 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 ZSCAN16Q9H4T2 348 aaPredicted RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 PSTPIP2Q9H939 334 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 ZCCHC17Q9NP64 241 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 A1CFQ9NQ94 594 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 EGFL7Q9UHF1 273 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 MRPL11Q9Y3B7 192 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 RABGAP1Q9Y3P9 1069 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 PCDHB6Q9Y5E3 794 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 CLIC4Q9Y696 253 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 DDX49Q9Y6V7 483 aaKnown RBP6.77□□□□□ -1.33
FOXN3-218ENST00000557718 EVPLQ92817 2033 aa6.77□□□□□ -1.33
FOXN3-218ENST00000557718 TDP2O95551 362 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ECEL1O95672 775 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 B3GALT4O96024 378 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 CFBP00751 764 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 PDIA4P13667 645 aaKnown RBP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 XBP1P17861 261 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ERCC3P19447 782 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 RAB6AP20340 208 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 GNA11P29992 359 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 MRPL12P52815 198 aaKnown RBP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 GRIN1Q05586 938 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 GRM1Q13255 1194 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 CRHR2Q13324 411 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 BAATQ14032 418 aaPredicted RBP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 MAP7Q14244 749 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 PLS1Q14651 629 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 SAFBQ15424 915 aaKnown RBP eCLIP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 TKFCQ3LXA3 575 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 C17orf99Q6UX52 265 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 DYMQ7RTS9 669 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ANKRD13CQ8N6S4 541 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 TBCKQ8TEA7 893 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 FBXL18Q96ME1 805 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 MBOAT7Q96N66 472 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 TAAR1Q96RJ0 339 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 PARK7Q99497 189 aaKnown RBP6.76□□□□□ -1.33
FOXN3-218ENST00000557718 TMEM60Q9H2L4 133 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 SEMA6CQ9H3T2 930 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ACAD9Q9H845 621 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 ZFYVE1Q9HBF4 777 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 FAM105AQ9NUU6 356 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 CYP39A1Q9NYL5 469 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 CPA4Q9UI42 421 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 HTTP42858 3142 aa6.76□□□□□ -1.33
FOXN3-218ENST00000557718 DNAJC25-GNG10A0A024R161 153 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 CCDC194A0A1B0GVG4 234 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 FIBPO43427 364 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 SLC37A4O43826 429 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 GADD45BO75293 160 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 POLR2MP0CAP2 368 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 SREBF1P36956 1147 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 GCLCP48506 637 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 INHBEP58166 350 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 UBXN2AP68543 259 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 MRPS9P82933 396 aaKnown RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 CNTN2Q02246 1040 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 CEBPZQ03701 1054 aaKnown RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 NOGQ13253 232 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 AP3B2Q13367 1082 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 NONOQ15233 471 aaKnown RBP eCLIP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 SF3A1Q15459 793 aaKnown RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 TAF1CQ15572 869 aaPredicted RBP6.75□□□□□ -1.33
FOXN3-218ENST00000557718 IL17AQ16552 155 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 FAM110CQ1W6H9 321 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 TTC38Q5R3I4 469 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 ANO1Q5XXA6 986 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 NSMFQ6X4W1 530 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 RNF207Q6ZRF8 634 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 TP53INP2Q8IXH6 220 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 FAM133AQ8N9E0 248 aa6.75□□□□□ -1.33
FOXN3-218ENST00000557718 TMEM87AQ8NBN3 555 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms