RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GNL3LQ9NVN8 582 aaKnown RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 DNAJC28Q9NX36 388 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PNMA2Q9UL42 364 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PHTF1Q9UMS5 762 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 DNM3Q9UQ16 869 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF292O60281 2723 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 CFAP47Q6ZTR5 3102 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 EEA1Q15075 1411 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 GPR179Q6PRD1 2367 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PIK3C2AO00443 1686 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 TUBGCP6Q96RT7 1819 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 SCDO00767 359 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 WNT11O96014 354 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 AKAP5P24588 427 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 PTX3P26022 381 aaPredicted RBP6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 IRAK1P51617 712 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF280AP59817 542 aaPredicted RBP6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 SPIRE1Q08AE8 756 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 CPZQ66K79 652 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 ERAP2Q6P179 960 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 OGFOD3Q6PK18 319 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 HHIPL2Q6UWX4 724 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 ZPBP2Q6X784 338 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 CATIPQ7Z7H3 387 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 NLRP10Q86W26 655 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 TICAM2Q86XR7 235 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 MIER2Q8N344 545 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 ENAHQ8N8S7 591 aaPredicted RBP6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 PNISRQ8TF01 805 aaKnown RBP6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 DPF3Q92784 378 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 TNIP3Q96KP6 325 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 TBC1D32Q96NH3 1257 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 C1QTNF1Q9BXJ1 281 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 CSRNP2Q9H175 543 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 ZMAT4Q9H898 229 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 BCL9O00512 1426 aa6.05□□□□□ -1.44
MTHFD1-216ENST00000557539 KIF7Q2M1P5 1343 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 RPTORQ8N122 1335 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TCRBV5S4A2TA0A5A2 114 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 HMGB1P1B2RPK0 211 aaPredicted RBP6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 H7BY64 318 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 NPHP1O15259 732 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TCEA3O75764 348 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 FOSL1P15407 271 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 FPR2P25090 351 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 CD40P25942 277 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TRAPPC10P48553 1259 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 USP14P54578 494 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TGFB2P61812 414 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 SRSF2Q01130 221 aaKnown RBP6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 RAPGEF1Q13905 1077 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 IFI16Q16666 785 aaKnown RBP6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TOR2AQ5JU69 321 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 ZFYVE27Q5T4F4 411 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 CYP2R1Q6VVX0 501 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 RNF111Q6ZNA4 994 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 CHST15Q7LFX5 561 aaPredicted RBP6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 NOSTRINQ8IVI9 506 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 ZBTB34Q8NCN2 500 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 GJA10Q969M2 543 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 TRMT2BQ96GJ1 504 aaKnown RBP6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 ACAP3Q96P50 834 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 OSBPL1AQ9BXW6 950 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 MAF1Q9H063 256 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 PRO3102Q9H379 93 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 CFAP54Q96N23 3096 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 SBNO1A3KN83 1393 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 SPTBN4Q9H254 2564 aa6.04□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF644Q9H582 1327 aaPredicted RBP6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 FAM170BA6NMN3 283 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 A6NNZ2 444 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 H3BS24 57 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 MAN2B1O00754 1011 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 NKRFO15226 690 aaKnown RBP eCLIP6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 FGAP02671 866 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 OSMP13725 252 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 RHCEP18577 417 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 EN2P19622 333 aaPredicted RBP6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 C5AR1P21730 350 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 RHDQ02161 417 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 TMEM132BQ14DG7 1078 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 CYP27C1Q4G0S4 372 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 ANO1Q5XXA6 986 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 ESRP1Q6NXG1 681 aaKnown RBP6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 C1orf228Q6PIY5 440 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 TOGARAM2Q6ZUX3 1019 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 SMIM5Q71RC9 77 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 OTOP3Q7RTS5 596 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 SRLQ86TD4 932 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 SKAP1Q86WV1 359 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 TEX2Q8IWB9 1127 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 GRAMD1CQ8IYS0 662 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 MYRIPQ8NFW9 859 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 FMNL2Q96PY5 1086 aa6.03□□□□□ -1.44
MTHFD1-216ENST00000557539 ACO2Q99798 780 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms