RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	TRIM6	Q9C030	488 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	IFT122	Q9HBG6	1241 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	UBN1	Q9NPG3	1134 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	AGPAT5	Q9NUQ2	364 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	KCND2	Q9NZV8	630 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	THEG	Q9P2T0	379 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	COG5	Q9UP83	839 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	MTCH2	Q9Y6C9	303 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	CNTNAP2	Q9UHC6	1331 aa		10.8	□□□□□ -0.68
RPS29-208	ENST00000557519	NCK2	O43639	380 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	STX6	O43752	255 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	EYA4	O95677	639 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	CYP11B2	P19099	503 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	SYT1	P21579	422 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	FGFR4	P22455	802 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	ARL2	P36404	184 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	LONP1	P36776	959 aa	Known RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	EFNA5	P52803	228 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	PTEN	P60484	403 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	UBE3A	Q05086	875 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	ADGRE1	Q14246	886 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	ZRSR1	Q15695	479 aa	Known RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	CCDC85B	Q15834	202 aa	Predicted RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	GLB1L	Q6UWU2	654 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	KSR1	Q8IVT5	923 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	ZNF579	Q8NAF0	562 aa	Known RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	DEPTOR	Q8TB45	409 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	SYMPK	Q92797	1274 aa	Known RBP	10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	BHMT2	Q9H2M3	363 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	XPNPEP1	Q9NQW7	623 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	FAM105A	Q9NUU6	356 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	STK39	Q9UEW8	545 aa		10.79	□□□□□ -0.68
RPS29-208	ENST00000557519	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	TRANK1	O15050	2925 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	COL6A3	P12111	3177 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	EPOP	A6NHQ4	379 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	ZBTB39	O15060	712 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	CSDE1	O75534	798 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	ARHGEF15	O94989	841 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	NAMPT	P43490	491 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	KRT17	Q04695	432 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	RNASEL	Q05823	741 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	DMP1	Q13316	513 aa	Predicted RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	CAPS	Q13938	189 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	MAPK6	Q16659	721 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	MAEA	Q7L5Y9	396 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	THNSL1	Q8IYQ7	743 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	CRIPAK	Q8N1N5	446 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	ZNF396	Q96N95	335 aa	Predicted RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	ADPGK	Q9BRR6	497 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	NSUN3	Q9H649	340 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	C17orf75	Q9HAS0	396 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	KANSL3	Q9P2N6	904 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	PUF60	Q9UHX1	559 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	MRPL42	Q9Y6G3	142 aa	Known RBP	10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	CHD7	Q9P2D1	2997 aa		10.78	□□□□□ -0.68
RPS29-208	ENST00000557519	KIAA1671	Q9BY89	1806 aa		10.77	□□□□□ -0.68
RPS29-208	ENST00000557519		H0YCG3	227 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	RFXAP	O00287	272 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	LPXN	O60711	386 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	ZNF623	O75123	536 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	NR1I2	O75469	434 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	FGFR1	P11362	822 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	GLRA2	P23416	452 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	ALDH7A1	P49419	539 aa	Known RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	SMTN	P53814	917 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	MRPS5	P82675	430 aa	Known RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	SF3A1	Q15459	793 aa	Known RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	HYI	Q5T013	277 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	PDE12	Q6L8Q7	609 aa	Known RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	CABP7	Q86V35	215 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	ASAP3	Q8TDY4	903 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	HLA-C	Q95604	372 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	ZNF558	Q96NG5	402 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	FAM193B	Q96PV7	902 aa	Predicted RBP	10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	FOXD4L1	Q9NU39	408 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	CCDC39	Q9UFE4	941 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	PCDHB2	Q9Y5E7	798 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	ZMYM2	Q9UBW7	1377 aa		10.77	□□□□□ -0.69
RPS29-208	ENST00000557519	MYH11	P35749	1972 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	N4BP3	O15049	544 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	TSPAN1	O60635	241 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	SSB	P05455	408 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	SRGAP2B	P0DMP2	458 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	ITGA4	P13612	1032 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	SCP2	P22307	547 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	ABCD1	P33897	745 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	MBTD1	Q05BQ5	628 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	BECN1	Q14457	450 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	SLC27A1	Q6PCB7	646 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	PPP4R3CP	Q6ZMV5	832 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	ZNF598	Q86UK7	904 aa	Known RBP	10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	COLGALT1	Q8NBJ5	622 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	HELQ	Q8TDG4	1101 aa		10.76	□□□□□ -0.69
RPS29-208	ENST00000557519	CASD1	Q96PB1	797 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms