RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CNR2P34972 360 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 SCNN1BP51168 640 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 KIF11P52732 1056 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 NFKB2Q00653 900 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 SLFN13Q68D06 897 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 TIGD7Q6NT04 549 aaPredicted RBP5.3□□□□□ -1.56
CHD8-212ENST00000557329 ABHD17CQ6PCB6 329 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 GLB1LQ6UWU2 654 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 PRRT2Q7Z6L0 340 aaPredicted RBP5.3□□□□□ -1.56
CHD8-212ENST00000557329 KBTBD2Q8IY47 623 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 TACO1Q9BSH4 297 aaKnown RBP5.3□□□□□ -1.56
CHD8-212ENST00000557329 USP36Q9P275 1121 aaKnown RBP5.3□□□□□ -1.56
CHD8-212ENST00000557329 WASF3Q9UPY6 502 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 MAPRE3Q9UPY8 281 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 SPO11Q9Y5K1 396 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 CD2APQ9Y5K6 639 aa5.3□□□□□ -1.56
CHD8-212ENST00000557329 ZNF536O15090 1300 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 SPATA31A3Q5VYP0 1347 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 SLIT2O94813 1529 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 MYOM2P54296 1465 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 A0A0G2JNJ9 132 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.29□□□□□ -1.56
CHD8-212ENST00000557329 K7ESM1 405 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 F2P00734 622 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 EPHB4P54760 987 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 BCAR1P56945 870 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 ALDH6A1Q02252 535 aaKnown RBP5.29□□□□□ -1.56
CHD8-212ENST00000557329 PLP2Q04941 152 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
CHD8-212ENST00000557329 SPATS1Q496A3 300 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 TTC38Q5R3I4 469 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 GPR158Q5T848 1215 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 CPZQ66K79 652 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 GGNQ86UU5 652 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 C11orf74Q86VG3 221 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 JAZF1Q86VZ6 243 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 EFHBQ8N7U6 833 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 OR2W6PQ8NHA6 318 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
CHD8-212ENST00000557329 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 SAMD11Q96NU1 681 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 ZDHHC5Q9C0B5 715 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 KANSL2Q9H9L4 492 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 Q9UFV3 132 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 SYNPO2Q9UMS6 1093 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 INVSQ9Y283 1065 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 ZDHHC9Q9Y397 364 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 SLC4A7Q9Y6M7 1214 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 TMEM131LA2VDJ0 1609 aa5.29□□□□□ -1.56
CHD8-212ENST00000557329 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 MARF1Q9Y4F3 1742 aaKnown RBP5.28□□□□□ -1.56
CHD8-212ENST00000557329 UBA6A0AVT1 1052 aaPredicted RBP5.28□□□□□ -1.56
CHD8-212ENST00000557329 PRAMEF22A3QJZ6 481 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 TRAF5O00463 557 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 IL18BPO95998 194 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 MMEP08473 750 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 ADRB1P08588 477 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 CPEP16870 476 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 SDSP20132 328 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 CD40P25942 277 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 MEOX1P50221 254 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 SAFB2Q14151 953 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD8-212ENST00000557329 RTP5Q14D33 572 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 EIF4HQ15056 248 aaKnown RBP5.28□□□□□ -1.56
CHD8-212ENST00000557329 TM4SF20Q53R12 229 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 DALRD3Q5D0E6 543 aaKnown RBP5.28□□□□□ -1.56
CHD8-212ENST00000557329 GRAMD4Q6IC98 578 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 PHYKPLQ8IUZ5 450 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 KIAA1958Q8N8K9 716 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 GFM2Q969S9 779 aaKnown RBP5.28□□□□□ -1.56
CHD8-212ENST00000557329 MAML3Q96JK9 1138 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 SYT3Q9BQG1 590 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD8-212ENST00000557329 STK32BQ9NY57 414 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 RBPJLQ9UBG7 517 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 PRKAB1Q9Y478 270 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 ABCC5O15440 1437 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 ADAMTS20P59510 1910 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 NALCNQ8IZF0 1738 aa5.28□□□□□ -1.56
CHD8-212ENST00000557329 PMS2P1A4D2B8 440 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 NPEPPSL1A6NEC2 478 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 B4GALT3O60512 393 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 HMGCRP04035 888 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 ITGB3P05106 788 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 CSF2RBP32927 897 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 KPNA1P52294 538 aaPredicted RBP5.27□□□□□ -1.57
CHD8-212ENST00000557329 LRRC32Q14392 662 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 ZNF460Q14592 562 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 ZNF827Q17R98 1081 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 CATSPEREQ5SY80 951 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 TMEM200BQ69YZ2 307 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 OTOP2Q7RTS6 562 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 NUDT10Q8NFP7 164 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 NUDT11Q96G61 164 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 JADE2Q9NQC1 790 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 PRDM11Q9NQV5 511 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 UCKL1Q9NWZ5 548 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 KCNG1Q9UIX4 513 aa5.27□□□□□ -1.57
CHD8-212ENST00000557329 COL22A1Q8NFW1 1626 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms