RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 WRAP73Q9P2S5 460 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-213ENST00000557262 COL4A3BPQ9Y5P4 624 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 ASAP2O43150 1006 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 HOXB8P17481 243 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-213ENST00000557262 KRT2P35908 639 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 RFC5P40937 340 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 POLGP54098 1239 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-213ENST00000557262 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
TUBB3-213ENST00000557262 EARS2Q5JPH6 523 aaKnown RBP17.77■□□□□ 0.44
TUBB3-213ENST00000557262 LLGL2Q6P1M3 1020 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 GLB1LQ6UWU2 654 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 TCP11Q8WWU5 503 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 LPPQ93052 612 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 TMEM169Q96HH4 297 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 RPGRIP1Q96KN7 1286 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 BRMS1Q9HCU9 246 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 RGL1Q9NZL6 768 aa17.77■□□□□ 0.44
TUBB3-213ENST00000557262 C2orf71A6NGG8 1288 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 OFD1O75665 1012 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 CXCL14O95715 111 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 YWHABP31946 246 aaKnown RBP17.76■□□□□ 0.43
TUBB3-213ENST00000557262 NR5A1Q13285 461 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 ME3Q16798 604 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 LONRF3Q496Y0 759 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 NCAPH2Q6IBW4 605 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 SYCE2Q6PIF2 218 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 HFE2Q6ZVN8 426 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 NECAB1Q8N987 351 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
TUBB3-213ENST00000557262 CASP10Q92851 521 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 PGBD4Q96DM1 585 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 DYDC2Q96IM9 177 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 LXNQ9BS40 222 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 ZSWIM4Q9H7M6 989 aa17.76■□□□□ 0.43
TUBB3-213ENST00000557262 GAS2O43903 313 aaKnown RBP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 SLITRK3O94933 977 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 SPIRE1Q08AE8 756 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 LAMTOR4Q0VGL1 99 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 CTTNQ14247 550 aaKnown RBP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 XKR9Q5GH70 373 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
TUBB3-213ENST00000557262 TPH2Q8IWU9 490 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 MFSD14AQ96MC6 490 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 KCNH6Q9H252 994 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 NRDE2Q9H7Z3 1164 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 AGPAT5Q9NUQ2 364 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 TBC1D13Q9NVG8 400 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 PCDHA12Q9UN75 941 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
TUBB3-213ENST00000557262 FAM205CA6NFA0 338 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 MEIS3P2A8K0S8 358 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 ZBTB39O15060 712 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
TUBB3-213ENST00000557262 GALTP07902 379 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 RNASELQ05823 741 aaKnown RBP17.74■□□□□ 0.43
TUBB3-213ENST00000557262 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 TRIM67Q6ZTA4 783 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 BMP8AQ7Z5Y6 402 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 APOL5Q9BWW9 433 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 INPP5FQ9Y2H2 1132 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 MUC6Q6W4X9 2439 aa17.74■□□□□ 0.43
TUBB3-213ENST00000557262 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
TUBB3-213ENST00000557262 HOXA11P31270 313 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-213ENST00000557262 CA8P35219 290 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 ZXDAP98168 799 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 CYP4A11Q02928 519 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 GIT2Q14161 759 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 EMC2Q15006 297 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 AGMOQ6ZNB7 445 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 RNF149Q8NC42 400 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 GTF3C6Q969F1 213 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 HSD17B14Q9BPX1 270 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 EIF2AK1Q9BQI3 630 aaKnown RBP17.73■□□□□ 0.43
TUBB3-213ENST00000557262 ZBP1Q9H171 429 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-213ENST00000557262 KANSL3Q9P2N6 904 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 IRAK3Q9Y616 596 aa17.73■□□□□ 0.43
TUBB3-213ENST00000557262 BTBD18B2RXH4 712 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 LYPLA2O95372 231 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 LARGE1O95461 756 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 ALDH2P05091 517 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 CTSAP10619 480 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms