RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 FBXO2Q9UK22 296 aaPredicted RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 MRPL42Q9Y6G3 142 aaKnown RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 EYSQ5T1H1 3165 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 LRRIQ4A6NIV6 560 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 ERLIN2O94905 339 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 EOMESO95936 686 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 FGFR1P11362 822 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 SKIP12755 728 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 ATF7P17544 494 aaPredicted RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 IGFBP4P22692 258 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 MARCKSP29966 332 aaPredicted RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 HOXA11P31270 313 aaPredicted RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 NASPP49321 788 aaPredicted RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 RAB27AP51159 221 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 CEBPZQ03701 1054 aaKnown RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 PAN2Q504Q3 1202 aaKnown RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 CALML4Q96GE6 196 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 RNF19AQ9NV58 838 aa25.32■■□□□ 1.64
TDP1-216ENST00000556867 SRPRBQ9Y5M8 271 aaKnown RBP25.32■■□□□ 1.64
TDP1-216ENST00000556867 C5orf67F2Z3F1 127 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 TSPAN1O60635 241 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 F13A1P00488 732 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 AXLP30530 894 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 NAMPTP43490 491 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 SLC39A14Q15043 492 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 PPP2R5AQ15172 486 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 AMHR2Q16671 573 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 RINT1Q6NUQ1 792 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 PLIN2Q99541 437 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 RUSC1Q9BVN2 902 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 TMEM117Q9H0C3 514 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 FAM105AQ9NUU6 356 aa25.31■■□□□ 1.64
TDP1-216ENST00000556867 TBKBP1A7MCY6 615 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 GTPBP6O43824 516 aaPredicted RBP25.3■■□□□ 1.64
TDP1-216ENST00000556867 ZNF623O75123 536 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 CTNNB1P35222 781 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 BMPR1AP36894 532 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 C1orf186Q6ZWK4 172 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 ZBTB8OSQ8IWT0 167 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 SYT2Q8N9I0 419 aaPredicted RBP25.3■■□□□ 1.64
TDP1-216ENST00000556867 CCDC51Q96ER9 411 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 ZNF396Q96N95 335 aaPredicted RBP25.3■■□□□ 1.64
TDP1-216ENST00000556867 CCSER1Q9C0I3 900 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 CSRNP2Q9H175 543 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 C2orf40Q9H1Z8 148 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 MTCH2Q9Y6C9 303 aa25.3■■□□□ 1.64
TDP1-216ENST00000556867 H3BNC9 293 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 RB1P06400 928 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 GUCY2CP25092 1073 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 SLC12A3P55017 1021 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 PKP1Q13835 747 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 FOXD4L5Q5VV16 416 aaPredicted RBP25.29■■□□□ 1.64
TDP1-216ENST00000556867 PPP4R3CPQ6ZMV5 832 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 DAW1Q8N136 415 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 RNF169Q8NCN4 708 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 FOXD4L4Q8WXT5 416 aaPredicted RBP25.29■■□□□ 1.64
TDP1-216ENST00000556867 IFT74Q96LB3 600 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 TIPINQ9BVW5 301 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 LMCD1Q9NZU5 365 aa25.29■■□□□ 1.64
TDP1-216ENST00000556867 PLA2G4BP0C869 781 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 NCBP1Q09161 790 aaKnown RBP25.28■■□□□ 1.64
TDP1-216ENST00000556867 MAPK7Q13164 816 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 KARSQ15046 597 aaKnown RBP25.28■■□□□ 1.64
TDP1-216ENST00000556867 FAM187BQ17R55 369 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 CLLU1OSQ5K130 101 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 UBXN11Q5T124 520 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 NOTUMQ6P988 496 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 LINC00301Q8NCQ3 95 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 DEPTORQ8TB45 409 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 PRIMPOLQ96LW4 560 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 DRC1Q96MC2 740 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 CASD1Q96PB1 797 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 PLVAPQ9BX97 442 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 PRMT7Q9NVM4 692 aaPredicted RBP25.28■■□□□ 1.64
TDP1-216ENST00000556867 KCND2Q9NZV8 630 aa25.28■■□□□ 1.64
TDP1-216ENST00000556867 MYH11P35749 1972 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 PRUNE2Q8WUY3 3088 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 HIP1RO75146 1068 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 SSBP05455 408 aaKnown RBP eCLIP25.27■■□□□ 1.64
TDP1-216ENST00000556867 ARF4P18085 180 aaPredicted RBP25.27■■□□□ 1.64
TDP1-216ENST00000556867 PLCG1P19174 1290 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 GPM6BQ13491 265 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 ABI1Q8IZP0 508 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 KRI1Q8N9T8 703 aaKnown RBP25.27■■□□□ 1.64
TDP1-216ENST00000556867 LRRC15Q8TF66 581 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 RSPH1Q8WYR4 309 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 CLIC6Q96NY7 704 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 C11orf84Q9BUA3 381 aaPredicted RBP25.27■■□□□ 1.64
TDP1-216ENST00000556867 CCDC113Q9H0I3 377 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 FZD8Q9H461 694 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 POLD4Q9HCU8 107 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 BLOC1S4Q9NUP1 217 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 PCDHB2Q9Y5E7 798 aa25.27■■□□□ 1.64
TDP1-216ENST00000556867 B4GALT5O43286 388 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 YEATS4O95619 227 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 STK38Q15208 465 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 USP49Q70CQ1 688 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 MRPL10Q7Z7H8 261 aaKnown RBP25.26■■□□□ 1.63
TDP1-216ENST00000556867 LRRC43Q8N309 656 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 RASSF8Q8NHQ8 419 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms