RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 PTPN4P29074 926 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 TUFMP49411 452 aaKnown RBP14.79□□□□□ -0.04
SHMT2-226ENST00000556825 SHROOM1Q2M3G4 852 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-226ENST00000556825 EPHA10Q5JZY3 1008 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 SULT6B1Q6IMI4 303 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 KLHDC10Q6PID8 442 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 PROSER2Q86WR7 435 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-226ENST00000556825 ESX1Q8N693 406 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 RIN3Q8TB24 985 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 GIPC3Q8TF64 312 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 LPIN2Q92539 896 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 ECSITQ9BQ95 431 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 FAF1Q9UNN5 650 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-226ENST00000556825 FMN2Q9NZ56 1722 aa14.79□□□□□ -0.04
SHMT2-226ENST00000556825 TLDC2A0PJX2 215 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 UNCXA6NJT0 531 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 COBLO75128 1261 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 BBOX1O75936 387 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 LPIN1Q14693 890 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 HSP90AA5PQ58FG0 334 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 ACSBG2Q5FVE4 666 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 CGB2Q6NT52 195 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 TAOK1Q7L7X3 1001 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 SH3RF1Q7Z6J0 888 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 ERP27Q96DN0 273 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 PRICKLE1Q96MT3 831 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-226ENST00000556825 BOLA2Q9H3K6 86 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 SALL4Q9UJQ4 1053 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 CRB1P82279 1406 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 FUOMA2VDF0 154 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 PTPN2P17706 415 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 POLR2EP19388 210 aaKnown RBP14.78□□□□□ -0.04
SHMT2-226ENST00000556825 POLGP54098 1239 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-226ENST00000556825 EIF2B5Q13144 721 aaKnown RBP14.78□□□□□ -0.04
SHMT2-226ENST00000556825 NDUFA5Q16718 116 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 SCFD2Q8WU76 684 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 CKAP2Q8WWK9 683 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 PLGRKTQ9HBL7 147 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 STXBP5LQ9Y2K9 1186 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 NALCNQ8IZF0 1738 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 LAMA4Q16363 1823 aa14.78□□□□□ -0.04
SHMT2-226ENST00000556825 CPLX1O14810 134 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 TEX28O15482 410 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 DAPK3O43293 454 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 TBCAO75347 108 aaKnown RBP14.77□□□□□ -0.04
SHMT2-226ENST00000556825 APOEP02649 317 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 UBL4AP11441 157 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 CRABP2P29373 138 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 YARSP54577 528 aaKnown RBP14.77□□□□□ -0.04
SHMT2-226ENST00000556825 CTAG1AP78358 180 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 COG7P83436 770 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 PLCB3Q01970 1234 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 GRIN1Q05586 938 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 TRIM29Q14134 588 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 TGFBIQ15582 683 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 TNFAIP8L3Q5GJ75 292 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 IZUMO2Q6UXV1 221 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 NEK10Q6ZWH5 1172 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 GRAMD2AQ8IUY3 354 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 MYO1HQ8N1T3 1032 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 MTMR8Q96EF0 704 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 UIMC1Q96RL1 719 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 CEP44Q9C0F1 390 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 COQ6Q9Y2Z9 468 aa14.77□□□□□ -0.04
SHMT2-226ENST00000556825 A0A088AWK7 358 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 A0A1W2PQ67 120 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 ZNF862O60290 1169 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 ZPR1O75312 459 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 STAM2O75886 525 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 DNM2P50570 870 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 PAK1Q13153 545 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 MTFR1Q15390 333 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 CYTH1Q15438 398 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 SPDYAQ5MJ70 313 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 KRT40Q6A162 431 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 DSTYKQ6XUX3 929 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 SPERTQ8NA61 448 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 PRPF31Q8WWY3 499 aaKnown RBP14.77□□□□□ -0.05
SHMT2-226ENST00000556825 SEC14L1Q92503 715 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 STMN2Q93045 179 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 PAGE5Q96GU1 130 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 NEURL2Q9BR09 285 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 GINM1Q9NU53 330 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 ANGPTL2Q9UKU9 493 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 SNX9Q9Y5X1 595 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 PDS5AQ29RF7 1337 aaKnown RBP14.77□□□□□ -0.05
SHMT2-226ENST00000556825 USP31Q70CQ4 1352 aa14.77□□□□□ -0.05
SHMT2-226ENST00000556825 H7C1D1 291 aa14.76□□□□□ -0.05
SHMT2-226ENST00000556825 DDX3XO00571 662 aaKnown RBP eCLIP14.76□□□□□ -0.058e-15■■□□□ 14.3
SHMT2-226ENST00000556825 CES2O00748 559 aa14.76□□□□□ -0.05
SHMT2-226ENST00000556825 HNRNPCL1O60812 293 aaKnown RBP14.76□□□□□ -0.05
SHMT2-226ENST00000556825 EIF2S1P05198 315 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms