RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PBXIP1Q96AQ6 731 aa14.9□□□□□ -0.02
TGFB3-204ENST00000556285 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
TGFB3-204ENST00000556285 IFT122Q9HBG6 1241 aa14.9□□□□□ -0.02
TGFB3-204ENST00000556285 NGRNQ9NPE2 291 aaKnown RBP14.9□□□□□ -0.02
TGFB3-204ENST00000556285 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
TGFB3-204ENST00000556285 FAM86C1Q9NVL1 165 aa14.9□□□□□ -0.02
TGFB3-204ENST00000556285 DACT1Q9NYF0 836 aa14.9□□□□□ -0.02
TGFB3-204ENST00000556285 PIN4Q9Y237 131 aaKnown RBP14.9□□□□□ -0.02
TGFB3-204ENST00000556285 CCDC194A0A1B0GVG4 234 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 C2orf71A6NGG8 1288 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 ZBTB39O15060 712 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 CCNT1O60563 726 aaKnown RBP14.89□□□□□ -0.03
TGFB3-204ENST00000556285 PFKFB2O60825 505 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 QARSP47897 775 aaKnown RBP14.89□□□□□ -0.03
TGFB3-204ENST00000556285 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 NEK8Q86SG6 692 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 ZNF410Q86VK4 478 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 MRPL43Q8N983 215 aaKnown RBP14.89□□□□□ -0.03
TGFB3-204ENST00000556285 TMEM143Q96AN5 459 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 MFSD14AQ96MC6 490 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 KCNH6Q9H252 994 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 NRDE2Q9H7Z3 1164 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 MINDY3Q9H8M7 445 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 CHST12Q9NRB3 414 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 FAM105AQ9NUU6 356 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 RGL1Q9NZL6 768 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 STK36Q9NRP7 1315 aa14.89□□□□□ -0.03
TGFB3-204ENST00000556285 CLASP2O75122 1294 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 ZC3H11AO75152 810 aaKnown RBP eCLIP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 OFD1O75665 1012 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 LARGE1O95461 756 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 WEE2P0C1S8 567 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 SRGAP2CP0DJJ0 459 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 FDPSP14324 419 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 AFF1P51825 1210 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 SMC1AQ14683 1233 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 PPP4R3AQ6IN85 833 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 FAM177A1Q8N128 213 aaPredicted RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 NECAB1Q8N987 351 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 DYDC2Q96IM9 177 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 CEP170P1Q96L14 293 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 FAM20AQ96MK3 541 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 VN1R3Q9BXE9 311 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 MRPL9Q9BYD2 267 aaKnown RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 ORC3Q9UBD5 711 aaPredicted RBP14.88□□□□□ -0.03
TGFB3-204ENST00000556285 DNAJB4Q9UDY4 337 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 HCFC2Q9Y5Z7 792 aa14.88□□□□□ -0.03
TGFB3-204ENST00000556285 CXCL14O95715 111 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 P4HBP07237 508 aaKnown RBP14.87□□□□□ -0.03
TGFB3-204ENST00000556285 CA8P35219 290 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 ALDH7A1P49419 539 aaKnown RBP14.87□□□□□ -0.03
TGFB3-204ENST00000556285 AK2P54819 239 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 CDC42EP1Q00587 391 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 CYP4A11Q02928 519 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 SPIRE1Q08AE8 756 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 NR5A1Q13285 461 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 CTTNQ14247 550 aaKnown RBP14.87□□□□□ -0.03
TGFB3-204ENST00000556285 NOMO2Q5JPE7 1267 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 NCAPH2Q6IBW4 605 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 AGMOQ6ZNB7 445 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 VPS52Q8N1B4 723 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 C12orf76Q8N812 135 aaPredicted RBP14.87□□□□□ -0.03
TGFB3-204ENST00000556285 TNFRSF25Q93038 417 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 LXNQ9BS40 222 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 POMKQ9H5K3 350 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 DHX33Q9H6R0 707 aaKnown RBP14.87□□□□□ -0.03
TGFB3-204ENST00000556285 COL4A3BPQ9Y5P4 624 aa14.87□□□□□ -0.03
TGFB3-204ENST00000556285 CFAP54Q96N23 3096 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 WNT7AO00755 349 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 ZNF623O75123 536 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 CDKL5O76039 1030 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 DDHD2O94830 711 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 GALTP07902 379 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 GCFC2P16383 781 aaKnown RBP14.86□□□□□ -0.03
TGFB3-204ENST00000556285 SLC11A1P49279 550 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 FOSBP53539 338 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
TGFB3-204ENST00000556285 SIGLEC14Q08ET2 396 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 LAMTOR4Q0VGL1 99 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 EPHA7Q15375 998 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 PTPN21Q16825 1174 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 UBXN11Q5T124 520 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 GLB1LQ6UWU2 654 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 FBXL6Q8N531 539 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 IGSF21Q96ID5 467 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 INO80BQ9C086 356 aaPredicted RBP14.86□□□□□ -0.03
TGFB3-204ENST00000556285 ZBP1Q9H171 429 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 AGPAT5Q9NUQ2 364 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 PCDHB2Q9Y5E7 798 aa14.86□□□□□ -0.03
TGFB3-204ENST00000556285 TDRD15B5MCY1 1934 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms