RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 ATF7P17544 494 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 BMPR1AP36894 532 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 PKP1Q13835 747 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 ZNF598Q86UK7 904 aaKnown RBP16.82■□□□□ 0.28
ACTN1-217ENST00000556203 MICALL1Q8N3F8 863 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 DEPTORQ8TB45 409 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 PPM1EQ8WY54 764 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 KIFAP3Q92845 792 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 TMEM117Q9H0C3 514 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 RNF19AQ9NV58 838 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 EOMESO95936 686 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 F13A1P00488 732 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 PLA2G4BP0C869 781 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 SKIP12755 728 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 NAMPTP43490 491 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 RAB27AP51159 221 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 SLC39A14Q15043 492 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 KARSQ15046 597 aaKnown RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 PPP2R5AQ15172 486 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 CCDC85BQ15834 202 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 SPECC1Q5M775 1068 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 CDCA2Q69YH5 1023 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 C1orf186Q6ZWK4 172 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 ZBTB8OSQ8IWT0 167 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 ABI1Q8IZP0 508 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 SYT2Q8N9I0 419 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 CPB2Q96IY4 423 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 IFT74Q96LB3 600 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 CASD1Q96PB1 797 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 KIFC3Q9BVG8 833 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 PCDHB2Q9Y5E7 798 aa16.81■□□□□ 0.28
ACTN1-217ENST00000556203 SRPRBQ9Y5M8 271 aaKnown RBP16.81■□□□□ 0.28
ACTN1-217ENST00000556203 C5orf67F2Z3F1 127 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 H3BNC9 293 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 B4GALT5O43286 388 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 HIP1RO75146 1068 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 RB1P06400 928 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 POU3F3P20264 500 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 AXLP30530 894 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 NASPP49321 788 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 SLC12A3P55017 1021 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 GPM6BQ13491 265 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 STK38Q15208 465 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 AMHR2Q16671 573 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 LONRF3Q496Y0 759 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 CLLU1OSQ5K130 101 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 UBXN11Q5T124 520 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 SPOUT1Q5T280 376 aaKnown RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 LPPQ93052 612 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 EPSTI1Q96J88 318 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 C11orf84Q9BUA3 381 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 CCSER1Q9C0I3 900 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 TYW1Q9NV66 732 aaKnown RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 HCSTQ9UBK5 93 aa16.8■□□□□ 0.28
ACTN1-217ENST00000556203 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-217ENST00000556203 ZNF623O75123 536 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 ARF4P18085 180 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-217ENST00000556203 LIG1P18858 919 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 PLCG1P19174 1290 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 NOTUMQ6P988 496 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 USP49Q70CQ1 688 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 DAW1Q8N136 415 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 KRI1Q8N9T8 703 aaKnown RBP16.79■□□□□ 0.28
ACTN1-217ENST00000556203 LINC00301Q8NCQ3 95 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
ACTN1-217ENST00000556203 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 DRC1Q96MC2 740 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 PLVAPQ9BX97 442 aa16.79■□□□□ 0.28
ACTN1-217ENST00000556203 PRMT7Q9NVM4 692 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-217ENST00000556203 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
ACTN1-217ENST00000556203 MEIS3P2A8K0S8 358 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 PEX3P56589 373 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 RAD51AP2Q09MP3 1159 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 MAPK7Q13164 816 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 DMP1Q13316 513 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-217ENST00000556203 MAPK6Q16659 721 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 PTPROQ16827 1216 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms