RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ATP2A2P16615 1042 aaKnown RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 ATF7P17544 494 aaPredicted RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 TNNT3P45378 269 aaPredicted RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 CLCN3P51790 818 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 RABGGTBP53611 331 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 NPEPPSP55786 919 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 ERVK-21P61565 698 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 RAD51AP2Q09MP3 1159 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 IKBKEQ14164 716 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 SAFBQ15424 915 aaKnown RBP eCLIP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 ZNF174Q15697 407 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 PLA2G4FQ68DD2 849 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 EFCAB12Q6NXP0 572 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 Q7L0L9 218 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 SPRED2Q7Z698 418 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 ZNF410Q86VK4 478 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 SEPT8Q92599 483 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 SYAP1Q96A49 352 aaPredicted RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 FTHL17Q9BXU8 183 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 IFIH1Q9BYX4 1025 aaKnown RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 ELAC1Q9H777 363 aaKnown RBP4.35□□□□□ -1.71
LINC00648-202ENST00000555985 PYCARDQ9ULZ3 195 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 SLC4A7Q9Y6M7 1214 aa4.35□□□□□ -1.71
LINC00648-202ENST00000555985 LINC01553A4QN01 128 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 DKC1O60832 514 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 VTNP04004 478 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 GHRP10912 638 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 HOXA11P31270 313 aaPredicted RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 CD52P31358 61 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 TXKP42681 527 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 FOSBP53539 338 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 IGBP1P78318 339 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 CDC42EP1Q00587 391 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 MAPK7Q13164 816 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 GRB10Q13322 594 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 ADGRE1Q14246 886 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 CTTNQ14247 550 aaKnown RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 GRIN2CQ14957 1233 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 FAM187BQ17R55 369 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 LARP1BQ659C4 914 aaKnown RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 KCNK18Q7Z418 384 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 TMCO2Q7Z6W1 182 aaPredicted RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 RSPH3Q86UC2 560 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 EXOC8Q8IYI6 725 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 DAW1Q8N136 415 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 LRRC71Q8N4P6 559 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 TIFAQ96CG3 184 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 CDX2Q99626 313 aaPredicted RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 RAD9AQ99638 391 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 NKX2-4Q9H2Z4 354 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 MINDY3Q9H8M7 445 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 KCNG1Q9UIX4 513 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 FBXO2Q9UK22 296 aaPredicted RBP4.34□□□□□ -1.71
LINC00648-202ENST00000555985 SMC3Q9UQE7 1217 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 NOD1Q9Y239 953 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 ANK1P16157 1881 aa4.34□□□□□ -1.71
LINC00648-202ENST00000555985 CTSHP09668 335 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 EIF4BP23588 611 aaKnown RBP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 TECP42680 631 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 SARSP49591 514 aaKnown RBP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 SLC12A3P55017 1021 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 GRIN1Q05586 938 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 MMRN1Q13201 1228 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 EMC2Q15006 297 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 PCBP1Q15365 356 aaKnown RBP eCLIP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 UBXN11Q5T124 520 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 NCAPH2Q6IBW4 605 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 MRPL10Q7Z7H8 261 aaKnown RBP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 FERMT3Q86UX7 667 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 DEFB123Q8N688 67 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 ZNF397Q8NF99 534 aaPredicted RBP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 ASAP3Q8TDY4 903 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 BSNDQ8WZ55 320 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 KCNF1Q9H3M0 494 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 ZNF576Q9H609 170 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 SEPT9Q9UHD8 586 aaPredicted RBP4.34□□□□□ -1.72
LINC00648-202ENST00000555985 RSPH14Q9UHP6 348 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 ST3GAL5Q9UNP4 418 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 CLIC4Q9Y696 253 aa4.34□□□□□ -1.72
LINC00648-202ENST00000555985 MYH11P35749 1972 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 TRIOBPQ9H2D6 2365 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 PP2D1A8MPX8 630 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 DGAT1O75907 488 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 EDN1P05305 212 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 GLRA2P23416 452 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 GTF2A1P52655 376 aaPredicted RBP4.33□□□□□ -1.72
LINC00648-202ENST00000555985 PTENP60484 403 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 MBTD1Q05BQ5 628 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM62Q0P6H9 643 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 LAMTOR4Q0VGL1 99 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 CAPSQ13938 189 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 KIZQ2M2Z5 673 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 MTERF2Q49AM1 385 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 TMCO4Q5TGY1 634 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 C1orf186Q6ZWK4 172 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 NPAS4Q8IUM7 802 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
LINC00648-202ENST00000555985 CHAMP1Q96JM3 812 aa4.33□□□□□ -1.72
LINC00648-202ENST00000555985 AK8Q96MA6 479 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms