RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DENND3A2RUS2 1198 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 BECN2A8MW95 431 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-208ENST00000555905 PRPF6O94906 941 aaKnown RBP12.14□□□□□ -0.47
TMEM260-208ENST00000555905 TIE1P35590 1138 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 PHKA2P46019 1235 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 GJA8P48165 433 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 EFNA5P52803 228 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ZNF200P98182 395 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-208ENST00000555905 GTF2BQ00403 316 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 STRN3Q13033 797 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 CAPSQ13938 189 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 HIC1Q14526 733 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 PTGISQ16647 500 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 KNOP1Q1ED39 458 aaKnown RBP12.14□□□□□ -0.47
TMEM260-208ENST00000555905 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ZC2HC1CQ53FD0 456 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-208ENST00000555905 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ZBTB8OSQ8IWT0 167 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 SYCP3Q8IZU3 236 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 NME8Q8N427 588 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 TMEM161BQ8NDZ6 487 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 GLIS3Q8NEA6 775 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ZNF507Q8TCN5 953 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 P2RX5Q93086 422 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 KIFC3Q9BVG8 833 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 TMEM206Q9H813 350 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 CBX8Q9HC52 389 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 EXOC7Q9UPT5 735 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 NOD1Q9Y239 953 aa12.14□□□□□ -0.47
TMEM260-208ENST00000555905 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 K7ERI5 159 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 ARVCFO00192 962 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 PPP1R37O75864 691 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 VTNP04004 478 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 CCNE1P24864 410 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 STX17P56962 302 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 TPM4P67936 248 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 MYL5Q02045 173 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 TPD52L1Q16890 204 aaPredicted RBP12.13□□□□□ -0.47
TMEM260-208ENST00000555905 SERINC5Q86VE9 423 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 ZNF410Q86VK4 478 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 SLC43A3Q8NBI5 491 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 STRA6Q9BX79 667 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 TBX20Q9UMR3 447 aa12.13□□□□□ -0.47
TMEM260-208ENST00000555905 SIP14410 1827 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 M0QZ92 97 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 IKBKBO14920 756 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 GPC3P51654 580 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 NLRP11P59045 1033 aaKnown RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 PTENP60484 403 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 LRRC63Q05C16 580 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 PTK7Q13308 1070 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 SPATA1Q5VX52 437 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 GOLGA5Q8TBA6 731 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 ENOX1Q8TC92 643 aaKnown RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 KCNN1Q92952 543 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-208ENST00000555905 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
TMEM260-208ENST00000555905 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 A0A087WZ62 844 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 PDXKO00764 312 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 HOXD13P35453 343 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 KCNA1Q09470 495 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 IQCB1Q15051 598 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 MAPK6Q16659 721 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms