RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 FAM105AQ9NUU6 356 aa16.55■□□□□ 0.24
EFCAB11-207ENST00000555608 TBX10O75333 385 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 GJB2P29033 226 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 TOB1P50616 345 aaPredicted RBP16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 DLX2Q07687 328 aaPredicted RBP16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 CAPSQ13938 189 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 CATSPER3Q86XQ3 398 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 POLR3FQ9H1D9 316 aaPredicted RBP16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 INPP5FQ9Y2H2 1132 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
EFCAB11-207ENST00000555608 DGAT1O75907 488 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 EOMESO95936 686 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 LTBRP36941 435 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 NRIP1P48552 1158 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 ORC2Q13416 577 aaPredicted RBP16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 COL19A1Q14993 1142 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 PLPP4Q5VZY2 271 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 KCNT2Q6UVM3 1135 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 RBM23Q86U06 439 aaKnown RBP16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 CPB2Q96IY4 423 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 TUFT1Q9NNX1 390 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 TLR9Q9NR96 1032 aa16.53■□□□□ 0.24
EFCAB11-207ENST00000555608 NT5C1B-RDH14C9J2C7 533 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 ASAP2O43150 1006 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 ERLIN2O94905 339 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 GLRA2P23416 452 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 RAB27AP51159 221 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 ERVFC1P60507 584 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 CTC1Q2NKJ3 1217 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 UBXN11Q5T124 520 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 C4orf32Q8N8J7 132 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 MICAL1Q8TDZ2 1067 aa16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 POLR3CQ9BUI4 534 aaPredicted RBP16.52■□□□□ 0.24
EFCAB11-207ENST00000555608 BDP1A6H8Y1 2624 aa16.52■□□□□ 0.23
EFCAB11-207ENST00000555608 INO80B-WBP1J3KQ70 363 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 TSPAN1O60635 241 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 ZC3H11AO75152 810 aaKnown RBP eCLIP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 HOXA11P31270 313 aaPredicted RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 ARL2P36404 184 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 PTENP60484 403 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 RBM10P98175 930 aaKnown RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 UBE3AQ05086 875 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 MBTD1Q05BQ5 628 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 TFDP1Q14186 410 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 ECM1Q16610 540 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 AGMOQ6ZNB7 445 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 ERMNQ8TAM6 284 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 EIF2AQ9BY44 585 aaKnown RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 KIF3AQ9Y496 699 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 PCDHB2Q9Y5E7 798 aa16.51■□□□□ 0.23
EFCAB11-207ENST00000555608 GRXCR2A6NFK2 248 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 FSCN2O14926 492 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 PER2O15055 1255 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 B4GALT5O43286 388 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 B4GALT3O60512 393 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 GLP2RO95838 553 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 SKIP12755 728 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 RPA1P27694 616 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 NDUFV1P49821 464 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 BCAR1P56945 870 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 PTGDRQ13258 359 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 HAUS3Q68CZ6 603 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 TMEM173Q86WV6 379 aaPredicted RBP16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 SLC39A11Q8N1S5 342 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 PPP2R3CQ969Q6 453 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 CD320Q9NPF0 282 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 TBC1D13Q9NVG8 400 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 LRWD1Q9UFC0 647 aa16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 TDRD15B5MCY1 1934 aaKnown RBP16.5■□□□□ 0.23
EFCAB11-207ENST00000555608 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 LRRIQ4A6NIV6 560 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 OFD1O75665 1012 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 PPM1AP35813 382 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 AFF1P51825 1210 aaKnown RBP16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 ADAM15Q13444 863 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 AMHR2Q16671 573 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 NOMO2Q5JPE7 1267 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 GLB1LQ6UWU2 654 aa16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 IFNLR1Q8IU57 520 aaPredicted RBP16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
EFCAB11-207ENST00000555608 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms