RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 CWH43Q9H720 699 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 CHST12Q9NRB3 414 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 AGPAT5Q9NUQ2 364 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 TYW1Q9NV66 732 aaKnown RBP15.19■□□□□ 0.02
SNX6-203ENST00000555416 ATG2AQ2TAZ0 1938 aa15.19■□□□□ 0.02
SNX6-203ENST00000555416 B4GALT5O43286 388 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 GTPBP6O43824 516 aaPredicted RBP15.18■□□□□ 0.02
SNX6-203ENST00000555416 TSPAN1O60635 241 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 DNAJB1P25685 340 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 PHKA2P46019 1235 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 PTPAQ15257 358 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 KRT79Q5XKE5 535 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
SNX6-203ENST00000555416 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
SNX6-203ENST00000555416 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
SNX6-203ENST00000555416 CPB2Q96IY4 423 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 RUSC1Q9BVN2 902 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 RAB34Q9BZG1 259 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 ALG13Q9NP73 1137 aaKnown RBP15.18■□□□□ 0.02
SNX6-203ENST00000555416 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
SNX6-203ENST00000555416 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 TTLL13PA6NNM8 815 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 CSPG5O95196 566 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 ITGB1P05556 798 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 CAMK1Q14012 370 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
SNX6-203ENST00000555416 HYIQ5T013 277 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 HELQQ8TDG4 1101 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 MRPL38Q96DV4 380 aaKnown RBP15.17■□□□□ 0.02
SNX6-203ENST00000555416 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
SNX6-203ENST00000555416 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 INO80B-WBP1J3KQ70 363 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 STX6O43752 255 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 EYA4O95677 639 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 EDN1P05305 212 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 PBX3P40426 434 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 AFF1P51825 1210 aaKnown RBP15.16■□□□□ 0.02
SNX6-203ENST00000555416 POU5F1BQ06416 359 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 MAPK7Q13164 816 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 TFDP1Q14186 410 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 AGMOQ6ZNB7 445 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 USP49Q70CQ1 688 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 CDR2LQ86X02 465 aaPredicted RBP15.16■□□□□ 0.02
SNX6-203ENST00000555416 HSCBQ8IWL3 235 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 DAW1Q8N136 415 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 KIFC3Q9BVG8 833 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
SNX6-203ENST00000555416 LMCD1Q9NZU5 365 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 PCDHB2Q9Y5E7 798 aa15.16■□□□□ 0.02
SNX6-203ENST00000555416 B4GALT3O60512 393 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 ZNF623O75123 536 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 EOMESO95936 686 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 RB1P06400 928 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 MARCKSP29966 332 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 TFF2Q03403 129 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 TMEM119Q4V9L6 283 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 CDCA2Q69YH5 1023 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 COLGALT1Q8NBJ5 622 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 SMG8Q8ND04 991 aaKnown RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 SPPL3Q8TCT6 385 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 C11orf84Q9BUA3 381 aaPredicted RBP15.15■□□□□ 0.02
SNX6-203ENST00000555416 NFKBIZQ9BYH8 718 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 DNM3Q9UQ16 869 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 RWDD3Q9Y3V2 267 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 VCANP13611 3396 aa15.15■□□□□ 0.02
SNX6-203ENST00000555416 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 BRWD1Q9NSI6 2320 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 SPTBN5Q9NRC6 3674 aaKnown RBP15.14■□□□□ 0.01
SNX6-203ENST00000555416 ERLIN2O94905 339 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 IRS1P35568 1242 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 PKP1Q13835 747 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 SKIV2LQ15477 1246 aaKnown RBP15.14■□□□□ 0.01
SNX6-203ENST00000555416 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 MRPL10Q7Z7H8 261 aaKnown RBP15.14■□□□□ 0.01
SNX6-203ENST00000555416 CABP7Q86V35 215 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 PLVAPQ9BX97 442 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
SNX6-203ENST00000555416 HES2Q9Y543 173 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 STK24Q9Y6E0 443 aa15.14■□□□□ 0.01
SNX6-203ENST00000555416 NPHP3-ACAD11A0A0J9YXS1 232 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 HOXA2O43364 376 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms