RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 CNTNAP2Q9UHC6 1331 aa10.07□□□□□ -0.8
AC004828.1-201ENST00000555303 WDFY4Q6ZS81 3184 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 LOC730098B7Z3J9 87 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 FDPSP14324 419 aaKnown RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 FGFR4P22455 802 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 NPEPPSP55786 919 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 LAMTOR4Q0VGL1 99 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 NR5A1Q13285 461 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 ORC2Q13416 577 aaPredicted RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 KCNC3Q14003 757 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 GIT2Q14161 759 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 MXD4Q14582 209 aaPredicted RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 CBX2Q14781 532 aaPredicted RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 EMC2Q15006 297 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 CALCRLQ16602 461 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 ME3Q16798 604 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 NCAPH2Q6IBW4 605 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 NSUN7Q8NE18 718 aaKnown RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 SUSD6Q92537 303 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 CASP10Q92851 521 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 CCDC51Q96ER9 411 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 SH2D3AQ9BRG2 576 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 PHF7Q9BWX1 381 aaPredicted RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 KCNH6Q9H252 994 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 PCDHA12Q9UN75 941 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 USP15Q9Y4E8 981 aaPredicted RBP10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 IRAK3Q9Y616 596 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
AC004828.1-201ENST00000555303 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 NEMFO60524 1076 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 CSDE1O75534 798 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 DGAT1O75907 488 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 AXLP30530 894 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 NEK4P51957 841 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 BCAR1P56945 870 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 TFDP1Q14186 410 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 XKR9Q5GH70 373 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 FERMT3Q86UX7 667 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 DIS3L2Q8IYB7 885 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 MRPL43Q8N983 215 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 DYDC2Q96IM9 177 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 CCDC43Q96MW1 224 aaKnown RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 MTRQ99707 1265 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 UBN1Q9NPG3 1134 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 ANKEF1Q9NU02 776 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 WRAP73Q9P2S5 460 aaPredicted RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 DAXXQ9UER7 740 aaPredicted RBP10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 RAPGEFL1Q9UHV5 662 aa10.05□□□□□ -0.8
AC004828.1-201ENST00000555303 DENND4AQ7Z401 1863 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 ZNF318Q5VUA4 2279 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 ZMYM2Q9UBW7 1377 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 C2orf71A6NGG8 1288 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 HIDE1A8MVS5 230 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 PER2O15055 1255 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 ERLIN2O94905 339 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 SLITRK3O94933 977 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 LARGE1O95461 756 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 PBX3P40426 434 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 CYP4A11Q02928 519 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 RNASELQ05823 741 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 ITIH3Q06033 890 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 MRPL10Q7Z7H8 261 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 DDX53Q86TM3 631 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 KSR1Q8IVT5 923 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 NECAB1Q8N987 351 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 NECTIN4Q96NY8 510 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 EIF2AK1Q9BQI3 630 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 LLPHQ9BRT6 129 aaKnown RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 ZBP1Q9H171 429 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 TBC1D13Q9NVG8 400 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 DZANK1Q9NVP4 752 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 RGL1Q9NZL6 768 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 PCDHB2Q9Y5E7 798 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
AC004828.1-201ENST00000555303 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
AC004828.1-201ENST00000555303 BTBD18B2RXH4 712 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms