RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 GRIN1Q05586 938 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CAPSQ13938 189 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 HAUS3Q68CZ6 603 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 FAM43BQ6ZT52 329 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CLP1Q92989 425 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 LPPQ93052 612 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 PNMA5Q96PV4 448 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
TRAPPC6B-205ENST00000555269 PRRC2BQ5JSZ5 2229 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 GRM6O15303 877 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 STX6O43752 255 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 MUTP22033 750 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 PHKA2P46019 1235 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CLLU1OSQ5K130 101 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 FOXD4L5Q5VV16 416 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 ARL6IP4Q66PJ3 421 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 FOXD4L4Q8WXT5 416 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
TRAPPC6B-205ENST00000555269 C5orf67F2Z3F1 127 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CSPG5O95196 566 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 EYA4O95677 639 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 EOMESO95936 686 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 POU5F1BQ06416 359 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TFDP1Q14186 410 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 PTPAQ15257 358 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CWH43Q9H720 699 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 DACT1Q9NYF0 836 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 USP20Q9Y2K6 914 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
TRAPPC6B-205ENST00000555269 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TTLL13PA6NNM8 815 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 B4GALT5O43286 388 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TSPAN1O60635 241 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 RB1P06400 928 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 DNAJB1P25685 340 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 MBTD1Q05BQ5 628 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SKIV2LQ15477 1246 aaKnown RBP13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 AMHR2Q16671 573 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SPOUT1Q5T280 376 aaKnown RBP13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 RUSC1Q9BVN2 902 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 PCDHB2Q9Y5E7 798 aa13.76□□□□□ -0.21
TRAPPC6B-205ENST00000555269 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 ZNF623O75123 536 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 ITGB1P05556 798 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 LIG1P18858 919 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 PBX3P40426 434 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CAMK1Q14012 370 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 HYIQ5T013 277 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CABP7Q86V35 215 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 KIFC3Q9BVG8 833 aa13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 EIF2AQ9BY44 585 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
TRAPPC6B-205ENST00000555269 RWDD3Q9Y3V2 267 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms