RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ANP32DO95626 131 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 NDUFB10O96000 172 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 MMP10P09238 476 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 H2AFZP0C0S5 128 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 GAP43P17677 238 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 RPL13P26373 211 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 FLT3P36888 993 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 RNASE9P60153 205 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 KNOP1Q1ED39 458 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 BMT2Q1RMZ1 405 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 TNFAIP8L3Q5GJ75 292 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 DUPD1Q68J44 220 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 H2AFVQ71UI9 128 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 EPM2AIP1Q7L775 607 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 NT5DC3Q86UY8 548 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 GJA10Q969M2 543 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 SPATS2LQ9NUQ6 558 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 INTS9Q9NV88 658 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 TBC1D7Q9P0N9 293 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 NCANO14594 1321 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 H0YIN7 160 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 SLC16A3O15427 465 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 TTI1O43156 1089 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 CAND2O75155 1236 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 OAS1P00973 400 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 STAT3P40763 770 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 SKIV2L2P42285 1042 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 PMS2P54278 862 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 PTK2Q05397 1052 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 MYO1EQ12965 1108 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 IKQ13123 557 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 BZW1Q7L1Q6 419 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 SUPT20HQ8NEM7 779 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 ATP8B4Q8TF62 1192 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 LENG9Q96B70 501 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 STAMBPL1Q96FJ0 436 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 ERP44Q9BS26 406 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 AP1M1Q9BXS5 423 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 CARD9Q9H257 536 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 ARMCX3Q9UH62 379 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 AMFRQ9UKV5 643 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 DAAM1Q9Y4D1 1078 aa11.55□□□□□ -0.56
MTHFD1-210ENST00000555252 NPHP3-ACAD11A0A0J9YXS1 232 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ABLIM1O14639 778 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 EYA4O95677 639 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 MUTP22033 750 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 NR2F2P24468 414 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ZNF76P36508 570 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 KCNH2Q12809 1159 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 GALNTL6Q49A17 601 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 SH3GL3Q99963 347 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ROPN1BQ9BZX4 212 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ADAM7Q9H2U9 754 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ZHX3Q9H4I2 956 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 ROPN1Q9HAT0 212 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 TYW1Q9NV66 732 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
MTHFD1-210ENST00000555252 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SNX3O60493 162 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 ATP2C2O75185 946 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 TBCAO75347 108 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SMNDC1O75940 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 RPSAP08865 295 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 CLTAP09496 248 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 CACNB3P54284 484 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 ACCSLQ4AC99 568 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 CCDC38Q502W7 563 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 EP400NLQ6ZTU2 488 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 TBC1D31Q96DN5 1066 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 FGFBP2Q9BYJ0 223 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 EPB41L4BQ9H329 900 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 ARHGEF10LQ9HCE6 1279 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
MTHFD1-210ENST00000555252 MTRF1LQ9UGC7 380 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms