RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 ZKSCAN5Q9Y2L8 839 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 PABPN1LA6NDY0 278 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 GNAT3A8MTJ3 354 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 B4E1Z4 1266 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 NFIBO00712 420 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 AQP7O14520 342 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 P4HA2O15460 535 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TGM5O43548 720 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 B3GALT2O43825 422 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 PSPNO60542 156 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 ALDH2P05091 517 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 GLI1P08151 1106 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 POU2F2P09086 479 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 NAT1P18440 290 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 KRT9P35527 623 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TDO2P48775 406 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 CASP5P51878 434 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 SESN3P58005 492 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 BPIFB3P59826 476 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 SLC14A2Q15849 920 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TAF12Q16514 161 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 DGKKQ5KSL6 1271 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 FAM205BPQ63HN1 556 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 DENND5AQ6IQ26 1287 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 HIBCHQ6NVY1 386 aaPredicted RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 DARS2Q6PI48 645 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 C4orf50Q6ZRC1 276 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 CCDC129Q6ZRS4 1044 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 MILR1Q7Z6M3 343 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 TTC30AQ86WT1 665 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 LMNTD2Q8IXW0 634 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 APPL2Q8NEU8 664 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 PIWIL2Q8TC59 973 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 ADAMTS18Q8TE60 1221 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 UCMAQ8WVF2 138 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 RIN2Q8WYP3 895 aaPredicted RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 C1orf159Q96HA4 380 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 SORBS1Q9BX66 1292 aaKnown RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 UBN1Q9NPG3 1134 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 HELLSQ9NRZ9 838 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 MAGED2Q9UNF1 606 aaPredicted RBP4.44□□□□□ -1.7
KTN1-220ENST00000555172 GPR34Q9UPC5 381 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 SRPK3Q9UPE1 567 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
KTN1-220ENST00000555172 GTPBP10A4D1E9 387 aaKnown RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 A6NLC8 198 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 H0Y8X5 98 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 IGF2BP3O00425 579 aaKnown RBP eCLIP4.43□□□□□ -1.7
KTN1-220ENST00000555172 UBXN7O94888 489 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 SRGAP2CP0DJJ0 459 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 AKR1B1P15121 316 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 VCAM1P19320 739 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 HOXA5P20719 270 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 ELF1P32519 619 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 CTNNA1P35221 906 aaKnown RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 ICA1Q05084 483 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 SCRN1Q12765 414 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 PDCD1Q15116 288 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 MEA1Q16626 185 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 RNF220Q5VTB9 566 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 NPNTQ6UXI9 565 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 MTDHQ86UE4 582 aaKnown RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 DENND1CQ8IV53 801 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 MIER2Q8N344 545 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 MFSD4AQ8N468 514 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 ANKRD52Q8NB46 1076 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 PCYOX1LQ8NBM8 494 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 DAGLBQ8NCG7 672 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 DCAF4Q8WV16 495 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 USP13Q92995 863 aaPredicted RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 KIRREL1Q96J84 757 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 Q96M66 194 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 NSUN3Q9H649 340 aaKnown RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 MKNK2Q9HBH9 465 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 GPATCH2Q9NW75 528 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.43□□□□□ -1.7
KTN1-220ENST00000555172 L1RE1Q9UN81 338 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 TTLL3Q9Y4R7 772 aa4.43□□□□□ -1.7
KTN1-220ENST00000555172 FAM170AA1A519 330 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 ANKRD18BA2A2Z9 1011 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 PTPDC1A2A3K4 754 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 ARIH2O95376 493 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 CSTBP04080 98 aaKnown RBP4.42□□□□□ -1.7
KTN1-220ENST00000555172 CD3EP07766 207 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 RAC2P15153 192 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 AKAP5P24588 427 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 DCAF7P61962 342 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 PMS2P11Q13670 270 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
KTN1-220ENST00000555172 SLC35F1Q5T1Q4 408 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 NUGGCQ68CJ6 796 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 FAM214BQ7L5A3 538 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 KIF18BQ86Y91 864 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 TEX11Q8IYF3 940 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 NRSN1Q8IZ57 195 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 KIAA0319LQ8IZA0 1049 aa4.42□□□□□ -1.7
KTN1-220ENST00000555172 ZNF655Q8N720 491 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms