RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 INPP4AQ96PE3 977 aaPredicted RBP10.8□□□□□ -0.68
PRKCH-211ENST00000555082 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 TLR10Q9BXR5 811 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 FGFBP2Q9BYJ0 223 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 ZHX3Q9H4I2 956 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
PRKCH-211ENST00000555082 LRRC53A6NM62 1247 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ZBTB48P10074 688 aaPredicted RBP10.79□□□□□ -0.68
PRKCH-211ENST00000555082 NR1D1P20393 614 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 USP8P40818 1118 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 GSCP56915 257 aaPredicted RBP10.79□□□□□ -0.68
PRKCH-211ENST00000555082 KCTD2Q14681 263 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 LRRC41Q15345 812 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 HYIQ5T013 277 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 EMBQ6PCB8 327 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ANKRD23Q86SG2 305 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 KLHL7Q8IXQ5 586 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 CCT8L2Q96SF2 557 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 NLRC4Q9NPP4 1024 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRKCH-211ENST00000555082 STK17AQ9UEE5 414 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 FBXO40Q9UH90 709 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 SFI1A8K8P3 1242 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 RSPH10B2B2RC85 870 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 RSPH10BP0C881 870 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 BCRP11274 1271 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 CYP11B2P19099 503 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 CCNE1P24864 410 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ARID5AQ03989 594 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 TDRD12Q587J7 1177 aaKnown RBP10.79□□□□□ -0.68
PRKCH-211ENST00000555082 CEP85LQ5SZL2 805 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 CASKIN2Q8WXE0 1202 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 ALS2CR12Q96Q35 445 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 LXNQ9BS40 222 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 RUSC1Q9BVN2 902 aa10.79□□□□□ -0.68
PRKCH-211ENST00000555082 RHOBTB3O94955 611 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 SLC25A27O95847 323 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
PRKCH-211ENST00000555082 SLC12A3P55017 1021 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PTGISQ16647 500 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 ZNF662Q6ZS27 426 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 MAEAQ7L5Y9 396 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 NLRP14Q86W24 1093 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PIK3R5Q8WYR1 880 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 DNAJC19Q96DA6 116 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 RIT2Q99578 217 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 EPN3Q9H201 632 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 CUEDC2Q9H467 287 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 DNM3Q9UQ16 869 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PFASO15067 1338 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 KDM3AQ9Y4C1 1321 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 FAM170AA1A519 330 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 EPB41P11171 864 aaKnown RBP10.78□□□□□ -0.68
PRKCH-211ENST00000555082 KCNA2P16389 499 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 STXBP2Q15833 593 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 KLHDC7AQ5VTJ3 777 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 CYP4F22Q6NT55 531 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 DNAAF5Q86Y56 855 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 TEX2Q8IWB9 1127 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 FBXO16Q8IX29 292 aaPredicted RBP10.78□□□□□ -0.68
PRKCH-211ENST00000555082 IFT20Q8IY31 132 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 IQCKQ8N0W5 287 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 SAMD3Q8N6K7 520 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 NT5C3AQ9H0P0 336 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PPP1R37O75864 691 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 ARIH2O95376 493 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 ADORA2AP29274 412 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 HLTFQ14527 1009 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRKCH-211ENST00000555082 EPHA7Q15375 998 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 LY6KQ17RY6 165 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 NIPA1Q7RTP0 329 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 DDX42Q86XP3 938 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRKCH-211ENST00000555082 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 KIAA0895Q8NCT3 520 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 SEMA6BQ9H3T3 888 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PDGFCQ9NRA1 345 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 PLAAQ9Y263 795 aa10.78□□□□□ -0.68
PRKCH-211ENST00000555082 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 TMOD1P28289 359 aa10.77□□□□□ -0.69
PRKCH-211ENST00000555082 RDXP35241 583 aaKnown RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 KCNB1Q14721 858 aa10.77□□□□□ -0.69
PRKCH-211ENST00000555082 TAF1CQ15572 869 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 GJC2Q5T442 439 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 KDM7AQ6ZMT4 941 aa10.77□□□□□ -0.69
PRKCH-211ENST00000555082 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
PRKCH-211ENST00000555082 COPS5Q92905 334 aa10.77□□□□□ -0.69
PRKCH-211ENST00000555082 DHTKD1Q96HY7 919 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 POLR3CQ9BUI4 534 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-211ENST00000555082 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms