RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 RAB30Q15771 203 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 MAPK6Q16659 721 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 TMEM40Q8WWA1 233 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 CCDC47Q96A33 483 aaKnown RBP13.31□□□□□ -0.28
ACTN1-214ENST00000555075 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-214ENST00000555075 PARVGQ9HBI0 331 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 CHST12Q9NRB3 414 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 BLOC1S4Q9NUP1 217 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 PRMT7Q9NVM4 692 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-214ENST00000555075 USP25Q9UHP3 1055 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 PCDHB7Q9Y5E2 793 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
ACTN1-214ENST00000555075 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 A0A1B0GVL5 298 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 A0A1W2PQ27 194 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 A0A1W2PQ64 194 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 A0A1W2PQD8 194 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 GOLGA6L22H0YM25 854 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 TLL1O43897 1013 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 PLS3P13797 630 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 PFKFB1P16118 471 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.288e-6■□□□□ 8.9
ACTN1-214ENST00000555075 PTENP60484 403 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 ASIC1P78348 528 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 AXDND1Q5T1B0 1012 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-214ENST00000555075 CCDC65Q8IXS2 484 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 HACE1Q8IYU2 909 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 ABI1Q8IZP0 508 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 BICD1Q96G01 975 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 YME1L1Q96TA2 773 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-214ENST00000555075 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
ACTN1-214ENST00000555075 MYH15Q9Y2K3 1946 aa13.3□□□□□ -0.28
ACTN1-214ENST00000555075 K7ENM7 598 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 ENPP3O14638 875 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 PRKCBP05771 671 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 GAP43P17677 238 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 AXLP30530 894 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 ABCD1P33897 745 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 AFMP43652 599 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 PRPF4BQ13523 1007 aaKnown RBP13.29□□□□□ -0.28
ACTN1-214ENST00000555075 GPNMBQ14956 572 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 HERC6Q8IVU3 1022 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 CNNM3Q8NE01 707 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 DDX12PQ92771 950 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 ADPGKQ9BRR6 497 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 IFT122Q9HBG6 1241 aa13.29□□□□□ -0.28
ACTN1-214ENST00000555075 SLC16A4O15374 487 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 HOXA2O43364 376 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 NPTX2P47972 431 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 RAB27AP51159 221 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 DEFB103AP81534 67 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 GIT2Q14161 759 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-214ENST00000555075 SPOUT1Q5T280 376 aaKnown RBP13.28□□□□□ -0.28
ACTN1-214ENST00000555075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■□□□ 12.3
ACTN1-214ENST00000555075 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 STAMQ92783 540 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 CCDC51Q96ER9 411 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 KIFC3Q9BVG8 833 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 NFKBIZQ9BYH8 718 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 OSBPL7Q9BZF2 842 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-214ENST00000555075 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 PANK4Q9NVE7 773 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
ACTN1-214ENST00000555075 WDR81Q562E7 1941 aa13.27□□□□□ -0.28
ACTN1-214ENST00000555075 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.28
ACTN1-214ENST00000555075 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.28
ACTN1-214ENST00000555075 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 N4BP3O15049 544 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 TRAK2O60296 914 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 SLFN14P0C7P3 912 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 SCP2P22307 547 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 SARSP49591 514 aaKnown RBP13.27□□□□□ -0.29
ACTN1-214ENST00000555075 NDUFA8P51970 172 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 SMAD3P84022 425 aaKnown RBP13.27□□□□□ -0.29
ACTN1-214ENST00000555075 ARSHQ5FYA8 562 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 KANK3Q6NY19 840 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-214ENST00000555075 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 BSNDQ8WZ55 320 aa13.27□□□□□ -0.29
ACTN1-214ENST00000555075 CPB2Q96IY4 423 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms