RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 LRFN2Q9ULH4 789 aa14.3□□□□□ -0.12
MTHFD1-209ENST00000554768 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-209ENST00000554768 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 TSPAN1O60635 241 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 HIP1RO75146 1068 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 SLC34A2O95436 690 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 IBSPP21815 317 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 NAMPTP43490 491 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 ERVK-21P61565 698 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 MAPK7Q13164 816 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 ECHDC2Q86YB7 292 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 RAD54LQ92698 747 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 FZD8Q9H461 694 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 PRDM12Q9H4Q4 367 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 CCDC39Q9UFE4 941 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
MTHFD1-209ENST00000554768 COL6A3P12111 3177 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 CUTAO60888 179 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 ZNF623O75123 536 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 EOMESO95936 686 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 GATMP50440 423 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 NCBP1Q09161 790 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 BTG3Q14201 252 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 MCM6Q14566 821 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 UBXN11Q5T124 520 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 TWF2Q6IBS0 349 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 MICAL3Q7RTP6 2002 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 RASSF8Q8NHQ8 419 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 KCNG4Q8TDN1 519 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 DRC1Q96MC2 740 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 TGS1Q96RS0 853 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 NTPCRQ9BSD7 190 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 PANK2Q9BZ23 570 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
MTHFD1-209ENST00000554768 TTC3P53804 2025 aa14.27□□□□□ -0.12
MTHFD1-209ENST00000554768 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
MTHFD1-209ENST00000554768 NPHP3-ACAD11A0A0J9YXS1 232 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 RFXAPO00287 272 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 B4GALT5O43286 388 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 ERLIN2O94905 339 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 LINC00271P0C7V0 271 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 FGFR1P11362 822 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 AXLP30530 894 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 TXLNAP40222 546 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 NPTX2P47972 431 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 PEX3P56589 373 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 ADGRE1Q14246 886 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 FAM187BQ17R55 369 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 SHC4Q6S5L8 630 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 MRPL10Q7Z7H8 261 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 ZBTB8OSQ8IWT0 167 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 CMTR2Q8IYT2 770 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 DEPTORQ8TB45 409 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 CLP1Q92989 425 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 CHAMP1Q96JM3 812 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 CCDC113Q9H0I3 377 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 C2orf40Q9H1Z8 148 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 C17orf75Q9HAS0 396 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 FAM105AQ9NUU6 356 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 PCDHB2Q9Y5E7 798 aa14.27□□□□□ -0.13
MTHFD1-209ENST00000554768 A0A087X0B3 334 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 ACKR2O00590 384 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 SKIP12755 728 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 EFNA5P52803 228 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 TMEM192Q8IY95 271 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 SPIRE2Q8WWL2 714 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 CCDC51Q96ER9 411 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms