RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 LRFN2Q9ULH4 789 aa14.3□□□□□ -0.12
MTHFD1-208ENST00000554739 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-208ENST00000554739 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 TSPAN1O60635 241 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 HIP1RO75146 1068 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 SLC34A2O95436 690 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 IBSPP21815 317 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 NAMPTP43490 491 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 ERVK-21P61565 698 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 MAPK7Q13164 816 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 ECHDC2Q86YB7 292 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 RAD54LQ92698 747 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 FZD8Q9H461 694 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 PRDM12Q9H4Q4 367 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 CCDC39Q9UFE4 941 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
MTHFD1-208ENST00000554739 COL6A3P12111 3177 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 CUTAO60888 179 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 ZNF623O75123 536 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 EOMESO95936 686 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 GATMP50440 423 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 NCBP1Q09161 790 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 BTG3Q14201 252 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 MCM6Q14566 821 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 UBXN11Q5T124 520 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 TWF2Q6IBS0 349 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 MICAL3Q7RTP6 2002 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 RASSF8Q8NHQ8 419 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 KCNG4Q8TDN1 519 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 DRC1Q96MC2 740 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 TGS1Q96RS0 853 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 NTPCRQ9BSD7 190 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 PANK2Q9BZ23 570 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
MTHFD1-208ENST00000554739 TTC3P53804 2025 aa14.27□□□□□ -0.12
MTHFD1-208ENST00000554739 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
MTHFD1-208ENST00000554739 NPHP3-ACAD11A0A0J9YXS1 232 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 RFXAPO00287 272 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 B4GALT5O43286 388 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 ERLIN2O94905 339 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 LINC00271P0C7V0 271 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 FGFR1P11362 822 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 AXLP30530 894 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 TXLNAP40222 546 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 NPTX2P47972 431 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 PEX3P56589 373 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 ADGRE1Q14246 886 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 FAM187BQ17R55 369 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 SHC4Q6S5L8 630 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 MRPL10Q7Z7H8 261 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 ZBTB8OSQ8IWT0 167 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 CMTR2Q8IYT2 770 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 DEPTORQ8TB45 409 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 CLP1Q92989 425 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 CHAMP1Q96JM3 812 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 CCDC113Q9H0I3 377 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 C2orf40Q9H1Z8 148 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 C17orf75Q9HAS0 396 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 FAM105AQ9NUU6 356 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 PCDHB2Q9Y5E7 798 aa14.27□□□□□ -0.13
MTHFD1-208ENST00000554739 A0A087X0B3 334 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 ACKR2O00590 384 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 SKIP12755 728 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 EFNA5P52803 228 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 TMEM192Q8IY95 271 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 SPIRE2Q8WWL2 714 aa14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
MTHFD1-208ENST00000554739 CCDC51Q96ER9 411 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms