RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 ADGRA3Q8IWK6 1321 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 GPR182O15218 404 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 ASAP2O43150 1006 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 MGEA5O60502 916 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 HIP1RO75146 1068 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 CSDE1O75534 798 aaKnown RBP11.86□□□□□ -0.51
CNIH1-204ENST00000554683 FGFR4P22455 802 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
CNIH1-204ENST00000554683 PHKA2P46019 1235 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 KCNJ6P48051 423 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 ME1P48163 572 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
CNIH1-204ENST00000554683 PTENP60484 403 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
CNIH1-204ENST00000554683 MBTD1Q05BQ5 628 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 DSC3Q14574 896 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 E2F4Q16254 413 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 RESP18Q5W5W9 173 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 PHOSPHO2Q8TCD6 241 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 SPATA32Q96LK8 384 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 TIPINQ9BVW5 301 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 CCDC39Q9UFE4 941 aa11.86□□□□□ -0.51
CNIH1-204ENST00000554683 RBM19Q9Y4C8 960 aaKnown RBP11.86□□□□□ -0.51
CNIH1-204ENST00000554683 EYSQ5T1H1 3165 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 TRANK1O15050 2925 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 GRXCR1A8MXD5 290 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
CNIH1-204ENST00000554683 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 STAT6P42226 847 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 NAMPTP43490 491 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
CNIH1-204ENST00000554683 TFDP1Q14186 410 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 MCM6Q14566 821 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 ODR4Q5SWX8 454 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 RRAGBQ5VZM2 374 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 CCDC73Q6ZRK6 1079 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
CNIH1-204ENST00000554683 TMCO2Q7Z6W1 182 aaPredicted RBP11.85□□□□□ -0.51
CNIH1-204ENST00000554683 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 HERC6Q8IVU3 1022 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 KIFC3Q9BVG8 833 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 PBX4Q9BYU1 374 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
CNIH1-204ENST00000554683 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 AGPAT5Q9NUQ2 364 aa11.85□□□□□ -0.51
CNIH1-204ENST00000554683 NPHP3-ACAD11A0A0J9YXS1 232 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 LRRIQ4A6NIV6 560 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 TSPAN1O60635 241 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 GJB5O95377 273 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 AMHP03971 560 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 DNAJB2P25686 324 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 PBX2P40425 430 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 RABGGTBP53611 331 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 PCBP1Q15365 356 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 AMHR2Q16671 573 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 RTN4RL1Q86UN2 441 aaPredicted RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 REEP2Q9BRK0 252 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 INO80BQ9C086 356 aaPredicted RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 CCDC113Q9H0I3 377 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
CNIH1-204ENST00000554683 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
CNIH1-204ENST00000554683 C9IYK1 514 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 ENPP3O14638 875 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 NPTX2P47972 431 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 SARSP49591 514 aaKnown RBP11.83□□□□□ -0.52
CNIH1-204ENST00000554683 ZNF131P52739 623 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 DHX8Q14562 1220 aaKnown RBP11.83□□□□□ -0.52
CNIH1-204ENST00000554683 ADALQ6DHV7 355 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 PDILTQ8N807 584 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 IFT74Q96LB3 600 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 ADAM2Q99965 735 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 C2orf40Q9H1Z8 148 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 C17orf75Q9HAS0 396 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 POLD4Q9HCU8 107 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 RGS18Q9NS28 235 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 C1orf112Q9NSG2 853 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 ARHGAP28Q9P2N2 729 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
CNIH1-204ENST00000554683 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
CNIH1-204ENST00000554683 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms