RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 LONRF3Q496Y0 759 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 IER5LQ5T953 404 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 ASIC4Q96FT7 647 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 NRDE2Q9H7Z3 1164 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 MINDY3Q9H8M7 445 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 CYP26B1Q9NR63 512 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 HCFC2Q9Y5Z7 792 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 B4GALT3O60512 393 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 PFKFB2O60825 505 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 CXCL14O95715 111 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 GALTP07902 379 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 SFPQP23246 707 aaKnown RBP eCLIP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 AFF1P51825 1210 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 FEZF2Q8TBJ5 459 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 PBXIP1Q96AQ6 731 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 INO80BQ9C086 356 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 DHX33Q9H6R0 707 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 USP34Q70CQ2 3546 aa13.7□□□□□ -0.22
MTHFD1-207ENST00000554677 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 MTCL1Q9Y4B5 1905 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 ZBTB39O15060 712 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 P4HBP07237 508 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 UBXN11Q5T124 520 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 AGMOQ6ZNB7 445 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 MRPL10Q7Z7H8 261 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 C4orf19Q8IY42 314 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 VPS52Q8N1B4 723 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 PRSS33Q8NF86 280 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 PRPF31Q8WWY3 499 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 AUTS2Q8WXX7 1259 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 CASP10Q92851 521 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 TMEM143Q96AN5 459 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 NLRP4Q96MN2 994 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 RGL1Q9NZL6 768 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 DNAJB4Q9UDY4 337 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 IRAK3Q9Y616 596 aa13.69□□□□□ -0.22
MTHFD1-207ENST00000554677 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 STK36Q9NRP7 1315 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 CCDC194A0A1B0GVG4 234 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 TBX3O15119 743 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 CCNT1O60563 726 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 ZC3H11AO75152 810 aaKnown RBP eCLIP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 DDHD2O94830 711 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SRGAP2BP0DMP2 458 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 CTSAP10619 480 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SKIP12755 728 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SLC11A1P49279 550 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 MRE11P49959 708 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SIGLEC14Q08ET2 396 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 EPHA7Q15375 998 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SLC22A17Q8WUG5 538 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 TMEM169Q96HH4 297 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 CEP170P1Q96L14 293 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 POMKQ9H5K3 350 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 AGPAT5Q9NUQ2 364 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 PCDHB2Q9Y5E7 798 aa13.68□□□□□ -0.22
MTHFD1-207ENST00000554677 DENND4AQ7Z401 1863 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 LILRB3O75022 631 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 POLGP54098 1239 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-207ENST00000554677 NR5A1Q13285 461 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms