RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 FAM114A2Q9NRY5 505 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 GEMIN8Q9NWZ8 242 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM260Q9NX78 707 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 EHD2Q9NZN4 543 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 LRP2BPQ9P2M1 347 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 HAO1Q9UJM8 370 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MAFBQ9Y5Q3 323 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DUSP10Q9Y6W6 482 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 A0A1W2PRG0 241 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DTNBO60941 627 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PHF2O75151 1096 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RTN2O75298 545 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 LRRN2O75325 713 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SERPINB2P05120 415 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MDH1P40925 334 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 COPS2P61201 443 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PTK2Q05397 1052 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CTC1Q2NKJ3 1217 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 USP41Q3LFD5 358 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PREPLQ4J6C6 727 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 XKR4Q5GH76 650 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FAM47AQ5JRC9 791 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SPECC1Q5M775 1068 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FAM196AQ6ZSG2 479 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 RHOT2Q8IXI1 618 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 KATNAL2Q8IYT4 538 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SYCE1Q8N0S2 351 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 APBB2Q92870 758 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 GPKOWQ92917 476 aaPredicted RBP eCLIP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 CNKSR1Q969H4 720 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 DDX27Q96GQ7 796 aaKnown RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 BLZF1Q9H2G9 400 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 ACTR5Q9H9F9 607 aaPredicted RBP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SLC38A10Q9HBR0 1119 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SERPINB13Q9UIV8 391 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 MCM8Q9UJA3 840 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 FEM1BQ9UK73 627 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 PPP2R3BQ9Y5P8 575 aa3.76□□□□□ -1.81
SEC23A-207ENST00000554615 SF3B1O75533 1304 aaKnown RBP eCLIP3.76□□□□□ -1.81
SEC23A-207ENST00000554615 A0A0G2JS52 829 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 DPYSL4O14531 572 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MEFVO15553 781 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CALUO43852 315 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EXOC3O60645 756 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 C4BPAP04003 597 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 GNAZP19086 355 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ALDH1B1P30837 517 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ARL2P36404 184 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 HSD17B3P37058 310 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FMO5P49326 533 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PRELPP51888 382 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ARHGAP4P98171 946 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PDE4DQ08499 809 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MTMR3Q13615 1198 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ZSCAN26Q16670 478 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAM26FQ5R3K3 315 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FKBP15Q5T1M5 1219 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 HIBCHQ6NVY1 386 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PACS2Q86VP3 889 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 APLFQ8IW19 511 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CMTR1Q8N1G2 835 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 HELBQ8NG08 1087 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MAML1Q92585 1016 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FATE1Q969F0 183 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FGD4Q96M96 766 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MXRA8Q9BRK3 442 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 RAB34Q9BZG1 259 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 WNT8AQ9H1J5 351 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CDC42EP4Q9H3Q1 356 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PLAC1Q9HBJ0 212 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 UBN1Q9NPG3 1134 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 AGPAT3Q9NRZ7 376 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PANK4Q9NVE7 773 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 DDX43Q9NXZ2 648 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 BTBD7Q9P203 1132 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 UVRAGQ9P2Y5 699 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PI4KBQ9UBF8 816 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 HDAC6Q9UBN7 1215 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAN1Q9Y2M0 1017 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 NOC2LQ9Y3T9 749 aaKnown RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 ASTN2O75129 1339 aaPredicted RBP3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CLUHO75153 1309 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM64BA6NI03 449 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 E7ENQ6 273 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PDLIM1O00151 329 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 MYO1CO00159 1063 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 SMAPO00193 183 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 INPPL1O15357 1258 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAM153BP0C7A2 387 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 DNAJB1P25685 340 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CAP2P40123 477 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CRKP46108 304 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 EVA1CP58658 441 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FMO1Q01740 532 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 CAV1Q03135 178 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 KCNH2Q12809 1159 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PARP6Q2NL67 630 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 FAM153CQ494X1 144 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 PKDCCQ504Y2 493 aa3.75□□□□□ -1.81
SEC23A-207ENST00000554615 TRAPPC3LQ5T215 181 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms