RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SPTLC3Q9NUV7 552 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ADAM21Q9UKJ8 722 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 PRRG1O14668 218 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 C2orf69Q8N8R5 385 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 IGSF22Q8N9C0 903 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 FNIP1Q8TF40 1166 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 POF1BQ8WVV4 589 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 P3H4Q92791 437 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 LGMNQ99538 433 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM17Q9Y577 477 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 USP19O94966 1318 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 KIF21AQ7Z4S6 1674 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 A0A087X0T9 212 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 MYO1FO00160 1098 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 POLR2DO15514 142 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SMNDC1O75940 238 aaKnown RBP eCLIP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SEC31AO94979 1220 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 EIF4BP23588 611 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 CTCFP49711 727 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SDCCAG3Q96C92 435 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GIMAP4Q9NUV9 329 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 TTC7AQ9ULT0 858 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 PCF11O94913 1555 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GOLGA8RI6L899 631 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 PTPREP23469 700 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 MAP3K10Q02779 954 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GRIN1Q05586 938 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 MUM1Q2TAK8 710 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SIX6OS1Q8N1H7 587 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 BOLLQ8N9W6 283 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 NELFBQ8WX92 580 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 MRPS27Q92552 414 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 RNF25Q96BH1 459 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GRAMD1AQ96CP6 724 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SENP2Q9HC62 589 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ADA2Q9NZK5 511 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 CPSF4O95639 269 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 FTCDO95954 541 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 EPHB4P54760 987 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 BBS5Q8N3I7 341 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 MRPL50Q8N5N7 158 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ZBTB8BQ8NAP8 495 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 TTLL11Q8NHH1 800 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 TEKT1Q969V4 418 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 TESK2Q96S53 571 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 NUP50Q9UKX7 468 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 DNM3Q9UQ16 869 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GMPSP49915 693 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 RASIP1Q5U651 963 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 IFT20Q8IY31 132 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 KCNH5Q8NCM2 988 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SECISBP2LQ93073 1101 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ATP6V1HQ9UI12 483 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GGT7Q9UJ14 662 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 LAMC3Q9Y6N6 1575 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SH3TC1Q8TE82 1336 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ADCY6O43306 1168 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 NPTXRO95502 500 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 GABPB1Q06547 395 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 DEPDC1Q5TB30 811 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ALS2CLQ60I27 953 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 E4F1Q66K89 784 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ANKS3Q6ZW76 656 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 POTEDQ86YR6 584 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 C1orf112Q9NSG2 853 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 CKAP5Q14008 2032 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 DFFAO00273 331 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 ZSCAN22P10073 491 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 DMC1Q14565 340 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 SGSM1Q2NKQ1 1148 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 CAPRIN2Q6IMN6 1127 aaKnown RBP3.52□□□□□ -1.85
SYNE2-212ENST00000554584 NFKBIZQ9BYH8 718 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 EVA1BQ9NVM1 165 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 DTNAQ9Y4J8 743 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 CAPN7Q9Y6W3 813 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 FPGT-TNNI3KV9GXZ4 949 aa3.52□□□□□ -1.85
SYNE2-212ENST00000554584 POLA1P09884 1462 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ECEL1O95672 775 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 POU2F2P09086 479 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PRKAR1AP10644 381 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GPSM2P81274 684 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 C2orf54Q08AI8 447 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 DRP2Q13474 957 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 MCMDC2Q4G0Z9 681 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CCDC81Q6ZN84 652 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 GPR161Q8N6U8 529 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 AGAP3Q96P47 875 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KLC2Q9H0B6 622 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 MYLK2Q9H1R3 596 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SMARCAD1Q9H4L7 1026 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RMND1Q9NWS8 449 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FER1L5A0AVI2 2057 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FAAH2Q6GMR7 532 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PCGF5Q86SE9 256 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PACS2Q86VP3 889 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NRSN1Q8IZ57 195 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 LRRC71Q8N4P6 559 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 UBL4BQ8N7F7 174 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 HSPBP1Q9NZL4 362 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms