RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 KIR3DL1P43629 444 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 NOVP48745 357 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 NT5C2P49902 561 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 NEK4P51957 841 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 BNIP3Q12983 259 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 TOB2Q14106 344 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-212ENST00000554486 PLCL1Q15111 1095 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 SEC23AQ15436 765 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 GNPTABQ3T906 1256 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 KIAA1211LQ6NV74 962 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 NFXL1Q6ZNB6 911 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 FAM178BQ8IXR5 827 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF513Q8N8E2 541 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-212ENST00000554486 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ASB11Q8WXH4 323 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 HOOK2Q96ED9 719 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF341Q9BYN7 854 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 AGXT2Q9BYV1 514 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-212ENST00000554486 ALDH8A1Q9H2A2 487 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-212ENST00000554486 IL17RBQ9NRM6 502 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 PDRG1Q9NUG6 133 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 TCP11L1Q9NUJ3 509 aa7.35□□□□□ -1.23
SCFD1-212ENST00000554486 PHIPQ8WWQ0 1821 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 SH2B2O14492 632 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 IFIT3O14879 490 aaKnown RBP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 GH2P01242 217 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TSPY3P0CV98 308 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TSPY8P0CW00 308 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 AK2P54819 239 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 RNF4P78317 190 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 AUHQ13825 339 aaKnown RBP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 PRKG1Q13976 671 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 SEPT2Q15019 361 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 FXNQ16595 210 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 ABCB5Q2M3G0 1257 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TMEM67Q5HYA8 995 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 Q6ZUG5 572 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TMEM179Q6ZVK1 233 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 MOB2Q70IA6 237 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TMC3Q7Z5M5 1100 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 SIAH1Q8IUQ4 282 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 FBXL16Q8N461 479 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 ENAHQ8N8S7 591 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 ANKS1AQ92625 1134 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 CEP95Q96GE4 821 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 WRNIP1Q96S55 665 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 MTA3Q9BTC8 594 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 PRDM14Q9GZV8 571 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 LY9Q9HBG7 655 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 SEMA3GQ9NS98 782 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 MTMR4Q9NYA4 1195 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-212ENST00000554486 ZBTB21Q9ULJ3 1066 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 ZNF451Q9Y4E5 1061 aa7.34□□□□□ -1.23
SCFD1-212ENST00000554486 TNKSO95271 1327 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 MPHOSPH10O00566 681 aaKnown RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 CTNND1O60716 968 aaKnown RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 CD8BP10966 210 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 NF2P35240 595 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 TXKP42681 527 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 LIFRP42702 1097 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 WTAPQ15007 396 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 NOL9Q5SY16 702 aaKnown RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 CST9Q5W186 159 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 CBLL1Q75N03 491 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 SPRED2Q7Z698 418 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 IQCA1Q86XH1 822 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 PIWIL2Q8TC59 973 aaKnown RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 BRF1Q92994 677 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 ZKSCAN4Q969J2 545 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 SNX21Q969T3 373 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 UBAC1Q9BSL1 405 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 MKRN2Q9H000 416 aaKnown RBP7.33□□□□□ -1.24
SCFD1-212ENST00000554486 KLHL25Q9H0H3 589 aa7.33□□□□□ -1.24
SCFD1-212ENST00000554486 PASKQ96RG2 1323 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 UBE2Q2LH0YL09 131 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 BIN1O00499 593 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 DDAH1O94760 285 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CELF2O95319 508 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 LARGE1O95461 756 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 TTLL1O95922 423 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 EPHX1P07099 455 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 ASNSP08243 561 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 EEF2P13639 858 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 JUNBP17275 347 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 FUT4P22083 530 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 EVCP57679 992 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 ICA1Q05084 483 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 VGLL4Q14135 290 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms