RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DMTF1Q9Y222 760 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 PLIN4Q96Q06 1357 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 TRIOBPQ9H2D6 2365 aa3.01□□□□□ -1.93
PRPF39-206ENST00000554429 RALGAPA2Q2PPJ7 1873 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 AKR1B15C9JRZ8 316 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 J3KRW8 73 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TREHO43280 583 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CD4P01730 458 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 GNAI2P04899 355 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CYP2E1P05181 493 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 CAPN3P20807 821 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 RAD52P43351 418 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CDK7P50613 346 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PDE6CP51160 858 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 GABREP78334 506 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CTDSPL2Q05D32 466 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 G3BP1Q13283 466 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF792Q3KQV3 632 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TNNI3KQ59H18 835 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ARSHQ5FYA8 562 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ISM2Q6H9L7 571 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 NAA16Q6N069 864 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 PADI6Q6TGC4 694 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 DSTYKQ6XUX3 929 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 SPOCD1Q6ZMY3 1216 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 LHFPL2Q6ZUX7 228 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TBC1D1Q86TI0 1168 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 TTC6Q86TZ1 520 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 MYOCDQ8IZQ8 938 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CELF2-AS1Q8N7Q2 184 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 MIGA1Q8NAN2 632 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 DRAXINQ8NBI3 349 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 OR8H1Q8NGG4 311 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 LRRN4Q8WUT4 740 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 POF1BQ8WVV4 589 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ATXN2LQ8WWM7 1075 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 GBP4Q96PP9 640 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CDX2Q99626 313 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 RIOK1Q9BRS2 568 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 TCHPQ9BT92 498 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CDH19Q9H159 772 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 RBSNQ9H1K0 784 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 BTBD7Q9P203 1132 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF180Q9UJW8 692 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 BLOC1S6Q9UL45 172 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ZMYND8Q9ULU4 1186 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 FPGT-TNNI3KV9GXZ4 949 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 BAZ2AQ9UIF9 1905 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 ELP1O95163 1332 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 MROH7Q68CQ1 1323 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 SIP14410 1827 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 DNAJC25-GNG10A0A024R161 153 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ZBBXA8MT70 800 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 F5H423 210 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 FOXD2O60548 495 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 KINO60870 393 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 UPP2O95045 317 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ASMTLO95671 621 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 GZMAP12544 262 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TMOD1P28289 359 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TIMM10P62072 90 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PFKPQ01813 784 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PDE4BQ07343 736 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ITKQ08881 620 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 DPYDQ12882 1025 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PIN1Q13526 163 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 SMC1AQ14683 1233 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 COG2Q14746 738 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ACAP1Q15027 740 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CCL14Q16627 93 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CEP68Q76N32 757 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ADGRA1Q86SQ6 560 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 NLRP14Q86W24 1093 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 RIOX2Q8IUF8 465 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PJA1Q8NG27 643 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 BICD2Q8TD16 824 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 MEIS3Q99687 375 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 LBHD1Q9BQE6 289 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 SRRTQ9BXP5 876 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 CAPS2Q9BXY5 557 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 SPATC1LQ9H0A9 340 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TSPYL1Q9H0U9 437 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TTYH1Q9H313 450 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 OBP2AQ9NY56 170 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 PCSK1NQ9UHG2 260 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 GGT7Q9UJ14 662 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TBX21Q9UL17 535 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 Q9Y3F1 56 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 LAMA4Q16363 1823 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TCRBV5S4A2TA0A5A2 114 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 SERTM1A2A2V5 107 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM43BA6NCK2 446 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 WDR46O15213 610 aaKnown RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 PLA2G6O60733 806 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 TMCC2O75069 709 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ADAMTS4O75173 837 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 ZNF865P0CJ78 1059 aaPredicted RBP3□□□□□ -1.93
PRPF39-206ENST00000554429 SKIP12755 728 aa3□□□□□ -1.93
PRPF39-206ENST00000554429 CYP2B6P20813 491 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms